RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
CSNK1D-223ENST00000584472 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
CSNK1D-223ENST00000584472 ABCC9O60706 1549 aa33.97■■■■□ 3.03
CSNK1D-223ENST00000584472 RB1CC1Q8TDY2 1594 aa32.64■■■□□ 2.82
CSNK1D-223ENST00000584472 NACADO15069 1562 aa32.53■■■□□ 2.8
CSNK1D-223ENST00000584472 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
CSNK1D-223ENST00000584472 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
CSNK1D-223ENST00000584472 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
CSNK1D-223ENST00000584472 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
CSNK1D-223ENST00000584472 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
CSNK1D-223ENST00000584472 BICRAQ9NZM4 1560 aa31.63■■■□□ 2.65
CSNK1D-223ENST00000584472 PABPN1Q86U42 306 aaKnown RBP eCLIP31.6■■■□□ 2.65
CSNK1D-223ENST00000584472 DNAJC5BQ9UF47 199 aa31.57■■■□□ 2.64
CSNK1D-223ENST00000584472 SHROOM4Q9ULL8 1493 aa31.48■■■□□ 2.63
CSNK1D-223ENST00000584472 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
CSNK1D-223ENST00000584472 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
CSNK1D-223ENST00000584472 CC2D2AQ9P2K1 1620 aa30.79■■■□□ 2.52
CSNK1D-223ENST00000584472 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
CSNK1D-223ENST00000584472 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
CSNK1D-223ENST00000584472 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
CSNK1D-223ENST00000584472 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
CSNK1D-223ENST00000584472 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
CSNK1D-223ENST00000584472 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
CSNK1D-223ENST00000584472 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
CSNK1D-223ENST00000584472 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
CSNK1D-223ENST00000584472 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
CSNK1D-223ENST00000584472 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
CSNK1D-223ENST00000584472 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
CSNK1D-223ENST00000584472 WIZO95785 1651 aa29.37■■■□□ 2.29
CSNK1D-223ENST00000584472 CUX2O14529 1486 aa29.36■■■□□ 2.29
CSNK1D-223ENST00000584472 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
CSNK1D-223ENST00000584472 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
CSNK1D-223ENST00000584472 NESP48681 1621 aa29.26■■■□□ 2.27
CSNK1D-223ENST00000584472 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
CSNK1D-223ENST00000584472 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
CSNK1D-223ENST00000584472 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
CSNK1D-223ENST00000584472 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
CSNK1D-223ENST00000584472 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
CSNK1D-223ENST00000584472 DNAJC5Q9H3Z4 198 aa28.91■■■□□ 2.22
CSNK1D-223ENST00000584472 CFTRP13569 1480 aa28.83■■■□□ 2.21
CSNK1D-223ENST00000584472 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
CSNK1D-223ENST00000584472 WDR62O43379 1518 aa28.75■■■□□ 2.19
CSNK1D-223ENST00000584472 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
CSNK1D-223ENST00000584472 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
CSNK1D-223ENST00000584472 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.18
CSNK1D-223ENST00000584472 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
CSNK1D-223ENST00000584472 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
CSNK1D-223ENST00000584472 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
CSNK1D-223ENST00000584472 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
CSNK1D-223ENST00000584472 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
CSNK1D-223ENST00000584472 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
CSNK1D-223ENST00000584472 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
CSNK1D-223ENST00000584472 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
CSNK1D-223ENST00000584472 OSCARQ8IYS5 282 aa27.96■■■□□ 2.07
CSNK1D-223ENST00000584472 TARBP1Q13395 1621 aaKnown RBP27.95■■■□□ 2.06
CSNK1D-223ENST00000584472 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
CSNK1D-223ENST00000584472 EIF4G3O43432 1585 aaKnown RBP27.9■■■□□ 2.06
CSNK1D-223ENST00000584472 CUX1P39880 1505 aa27.87■■■□□ 2.05
CSNK1D-223ENST00000584472 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
CSNK1D-223ENST00000584472 SOGA1O94964 1423 aa27.78■■■□□ 2.04
CSNK1D-223ENST00000584472 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
CSNK1D-223ENST00000584472 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.035e-8■■■■■ 28.9
CSNK1D-223ENST00000584472 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
CSNK1D-223ENST00000584472 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.035e-6■■■■■ 38.2
CSNK1D-223ENST00000584472 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
CSNK1D-223ENST00000584472 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
CSNK1D-223ENST00000584472 SYNJ1O43426 1573 aa27.64■■■□□ 2.01
CSNK1D-223ENST00000584472 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
CSNK1D-223ENST00000584472 CHD1O14646 1710 aa27.59■■■□□ 2.01
CSNK1D-223ENST00000584472 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
CSNK1D-223ENST00000584472 GRIN2BQ13224 1484 aa27.56■■■□□ 2
CSNK1D-223ENST00000584472 TRIM41Q8WV44 630 aa27.55■■■□□ 2
CSNK1D-223ENST00000584472 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
CSNK1D-223ENST00000584472 RIMBP3CA6NJZ7 1639 aa27.54■■■□□ 2
CSNK1D-223ENST00000584472 RIMBP3BA6NNM3 1639 aa27.54■■■□□ 2
CSNK1D-223ENST00000584472 RIMBP3Q9UFD9 1639 aa27.54■■■□□ 2
CSNK1D-223ENST00000584472 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
CSNK1D-223ENST00000584472 ARHGEF11O15085 1522 aa27.51■■■□□ 2
CSNK1D-223ENST00000584472 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
CSNK1D-223ENST00000584472 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
CSNK1D-223ENST00000584472 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
CSNK1D-223ENST00000584472 FBLN2P98095 1184 aa27.42■■□□□ 1.98
CSNK1D-223ENST00000584472 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
CSNK1D-223ENST00000584472 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
CSNK1D-223ENST00000584472 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
CSNK1D-223ENST00000584472 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
CSNK1D-223ENST00000584472 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
CSNK1D-223ENST00000584472 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
CSNK1D-223ENST00000584472 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
CSNK1D-223ENST00000584472 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
CSNK1D-223ENST00000584472 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
CSNK1D-223ENST00000584472 NUP160Q12769 1436 aa27.14■■□□□ 1.93
CSNK1D-223ENST00000584472 KIF27Q86VH2 1401 aa27.14■■□□□ 1.93
CSNK1D-223ENST00000584472 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
CSNK1D-223ENST00000584472 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
CSNK1D-223ENST00000584472 IGF1RP08069 1367 aa26.99■■□□□ 1.91
CSNK1D-223ENST00000584472 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
CSNK1D-223ENST00000584472 CUL7Q14999 1698 aa26.98■■□□□ 1.91
CSNK1D-223ENST00000584472 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
CSNK1D-223ENST00000584472 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms