RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
ABCD4-203ENST00000465085 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
ABCD4-203ENST00000465085 ABCC9O60706 1549 aa28.7■■■□□ 2.19
ABCD4-203ENST00000465085 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
ABCD4-203ENST00000465085 NACADO15069 1562 aa27.13■■□□□ 1.93
ABCD4-203ENST00000465085 DNAJC5BQ9UF47 199 aa26.99■■□□□ 1.91
ABCD4-203ENST00000465085 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
ABCD4-203ENST00000465085 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
ABCD4-203ENST00000465085 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
ABCD4-203ENST00000465085 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.864e-8■■□□□ 13.1
ABCD4-203ENST00000465085 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
ABCD4-203ENST00000465085 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
ABCD4-203ENST00000465085 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
ABCD4-203ENST00000465085 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
ABCD4-203ENST00000465085 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
ABCD4-203ENST00000465085 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
ABCD4-203ENST00000465085 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
ABCD4-203ENST00000465085 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
ABCD4-203ENST00000465085 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
ABCD4-203ENST00000465085 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
ABCD4-203ENST00000465085 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
ABCD4-203ENST00000465085 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
ABCD4-203ENST00000465085 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
ABCD4-203ENST00000465085 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
ABCD4-203ENST00000465085 CUX2O14529 1486 aa24.84■■□□□ 1.57
ABCD4-203ENST00000465085 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
ABCD4-203ENST00000465085 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
ABCD4-203ENST00000465085 PEG3Q9GZU2 1588 aa24.68■■□□□ 1.54
ABCD4-203ENST00000465085 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
ABCD4-203ENST00000465085 NESP48681 1621 aa24.63■■□□□ 1.53
ABCD4-203ENST00000465085 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
ABCD4-203ENST00000465085 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
ABCD4-203ENST00000465085 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
ABCD4-203ENST00000465085 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
ABCD4-203ENST00000465085 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
ABCD4-203ENST00000465085 WIZO95785 1651 aa24.24■■□□□ 1.47
ABCD4-203ENST00000465085 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
ABCD4-203ENST00000465085 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
ABCD4-203ENST00000465085 WDR62O43379 1518 aa24.11■■□□□ 1.45
ABCD4-203ENST00000465085 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
ABCD4-203ENST00000465085 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
ABCD4-203ENST00000465085 CFTRP13569 1480 aa23.94■■□□□ 1.42
ABCD4-203ENST00000465085 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ABCD4-203ENST00000465085 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
ABCD4-203ENST00000465085 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
ABCD4-203ENST00000465085 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
ABCD4-203ENST00000465085 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
ABCD4-203ENST00000465085 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
ABCD4-203ENST00000465085 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
ABCD4-203ENST00000465085 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
ABCD4-203ENST00000465085 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
ABCD4-203ENST00000465085 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
ABCD4-203ENST00000465085 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
ABCD4-203ENST00000465085 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
ABCD4-203ENST00000465085 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
ABCD4-203ENST00000465085 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
ABCD4-203ENST00000465085 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
ABCD4-203ENST00000465085 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
ABCD4-203ENST00000465085 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
ABCD4-203ENST00000465085 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
ABCD4-203ENST00000465085 CHD1O14646 1710 aa23.28■■□□□ 1.32
ABCD4-203ENST00000465085 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
ABCD4-203ENST00000465085 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.316e-9■■□□□ 12.9
ABCD4-203ENST00000465085 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
ABCD4-203ENST00000465085 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
ABCD4-203ENST00000465085 SOGA1O94964 1423 aa23.1■■□□□ 1.29
ABCD4-203ENST00000465085 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
ABCD4-203ENST00000465085 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
ABCD4-203ENST00000465085 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
ABCD4-203ENST00000465085 CUX1P39880 1505 aa23.05■■□□□ 1.28
ABCD4-203ENST00000465085 FBLN2P98095 1184 aa23.05■■□□□ 1.28
ABCD4-203ENST00000465085 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
ABCD4-203ENST00000465085 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
ABCD4-203ENST00000465085 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
ABCD4-203ENST00000465085 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
ABCD4-203ENST00000465085 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
ABCD4-203ENST00000465085 GRIN2BQ13224 1484 aa22.95■■□□□ 1.26
ABCD4-203ENST00000465085 PBRM1Q86U86 1689 aa22.92■■□□□ 1.26
ABCD4-203ENST00000465085 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
ABCD4-203ENST00000465085 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
ABCD4-203ENST00000465085 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
ABCD4-203ENST00000465085 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
ABCD4-203ENST00000465085 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
ABCD4-203ENST00000465085 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
ABCD4-203ENST00000465085 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
ABCD4-203ENST00000465085 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
ABCD4-203ENST00000465085 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
ABCD4-203ENST00000465085 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
ABCD4-203ENST00000465085 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
ABCD4-203ENST00000465085 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
ABCD4-203ENST00000465085 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
ABCD4-203ENST00000465085 NUP160Q12769 1436 aa22.6■■□□□ 1.21
ABCD4-203ENST00000465085 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
ABCD4-203ENST00000465085 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
ABCD4-203ENST00000465085 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
ABCD4-203ENST00000465085 FHAD1B1AJZ9 1412 aa22.56■■□□□ 1.2
ABCD4-203ENST00000465085 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
ABCD4-203ENST00000465085 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
ABCD4-203ENST00000465085 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
ABCD4-203ENST00000465085 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms