RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
SPG7-203ENST00000561702 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
SPG7-203ENST00000561702 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
SPG7-203ENST00000561702 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
SPG7-203ENST00000561702 ABCC9O60706 1549 aa26.54■■□□□ 1.84
SPG7-203ENST00000561702 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
SPG7-203ENST00000561702 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SPG7-203ENST00000561702 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
SPG7-203ENST00000561702 NACADO15069 1562 aa26.11■■□□□ 1.77
SPG7-203ENST00000561702 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.74
SPG7-203ENST00000561702 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
SPG7-203ENST00000561702 UNC13AQ9UPW8 1703 aa25.47■■□□□ 1.67
SPG7-203ENST00000561702 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
SPG7-203ENST00000561702 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
SPG7-203ENST00000561702 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.63e-7■■■■□ 19.7
SPG7-203ENST00000561702 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
SPG7-203ENST00000561702 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
SPG7-203ENST00000561702 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
SPG7-203ENST00000561702 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
SPG7-203ENST00000561702 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
SPG7-203ENST00000561702 WIZO95785 1651 aa24.66■■□□□ 1.54
SPG7-203ENST00000561702 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
SPG7-203ENST00000561702 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
SPG7-203ENST00000561702 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
SPG7-203ENST00000561702 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
SPG7-203ENST00000561702 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
SPG7-203ENST00000561702 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
SPG7-203ENST00000561702 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
SPG7-203ENST00000561702 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
SPG7-203ENST00000561702 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.44
SPG7-203ENST00000561702 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
SPG7-203ENST00000561702 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
SPG7-203ENST00000561702 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
SPG7-203ENST00000561702 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
SPG7-203ENST00000561702 CFTRP13569 1480 aa23.55■■□□□ 1.36
SPG7-203ENST00000561702 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
SPG7-203ENST00000561702 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
SPG7-203ENST00000561702 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
SPG7-203ENST00000561702 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
SPG7-203ENST00000561702 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
SPG7-203ENST00000561702 NESP48681 1621 aa23.32■■□□□ 1.32
SPG7-203ENST00000561702 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
SPG7-203ENST00000561702 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
SPG7-203ENST00000561702 BIVM-ERCC5R4GMW8 1640 aa23.27■■□□□ 1.32
SPG7-203ENST00000561702 CUX1P39880 1505 aa23.24■■□□□ 1.31
SPG7-203ENST00000561702 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
SPG7-203ENST00000561702 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
SPG7-203ENST00000561702 LOC105371045A0A1W2PR82 267 aa23.16■■□□□ 1.3
SPG7-203ENST00000561702 SOGA1O94964 1423 aa23.15■■□□□ 1.3
SPG7-203ENST00000561702 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
SPG7-203ENST00000561702 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
SPG7-203ENST00000561702 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
SPG7-203ENST00000561702 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
SPG7-203ENST00000561702 EEA1Q15075 1411 aa23.06■■□□□ 1.28
SPG7-203ENST00000561702 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
SPG7-203ENST00000561702 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
SPG7-203ENST00000561702 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
SPG7-203ENST00000561702 URB2Q14146 1524 aaKnown RBP22.96■■□□□ 1.27
SPG7-203ENST00000561702 HRCP23327 699 aa22.95■■□□□ 1.26
SPG7-203ENST00000561702 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
SPG7-203ENST00000561702 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
SPG7-203ENST00000561702 EHMT2Q96KQ7 1210 aa22.91■■□□□ 1.26
SPG7-203ENST00000561702 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
SPG7-203ENST00000561702 KIF27Q86VH2 1401 aa22.83■■□□□ 1.24
SPG7-203ENST00000561702 KIF21BO75037 1637 aa22.81■■□□□ 1.24
SPG7-203ENST00000561702 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
SPG7-203ENST00000561702 CUX2O14529 1486 aa22.8■■□□□ 1.24
SPG7-203ENST00000561702 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
SPG7-203ENST00000561702 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
SPG7-203ENST00000561702 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
SPG7-203ENST00000561702 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
SPG7-203ENST00000561702 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
SPG7-203ENST00000561702 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
SPG7-203ENST00000561702 WDR62O43379 1518 aa22.71■■□□□ 1.23
SPG7-203ENST00000561702 PRXQ9BXM0 1461 aa22.7■■□□□ 1.22
SPG7-203ENST00000561702 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
SPG7-203ENST00000561702 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
SPG7-203ENST00000561702 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
SPG7-203ENST00000561702 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
SPG7-203ENST00000561702 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
SPG7-203ENST00000561702 IGF1RP08069 1367 aa22.65■■□□□ 1.22
SPG7-203ENST00000561702 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.21
SPG7-203ENST00000561702 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
SPG7-203ENST00000561702 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
SPG7-203ENST00000561702 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
SPG7-203ENST00000561702 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
SPG7-203ENST00000561702 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
SPG7-203ENST00000561702 IFT140Q96RY7 1462 aa22.52■■□□□ 1.19
SPG7-203ENST00000561702 CUL7Q14999 1698 aa22.5■■□□□ 1.19
SPG7-203ENST00000561702 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
SPG7-203ENST00000561702 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
SPG7-203ENST00000561702 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.189e-9■■■■□ 21.3
SPG7-203ENST00000561702 CLIP1P30622 1438 aa22.39■■□□□ 1.18
SPG7-203ENST00000561702 ZEB1P37275 1124 aaPredicted RBP22.36■■□□□ 1.17
SPG7-203ENST00000561702 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
SPG7-203ENST00000561702 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
SPG7-203ENST00000561702 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
SPG7-203ENST00000561702 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
SPG7-203ENST00000561702 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
SPG7-203ENST00000561702 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms