RNA–Protein interactions for RNA: ENST00000486667.5

SRSF11-215, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 5

Gene SRSF11, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-215ENST00000486667 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
SRSF11-215ENST00000486667 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SRSF11-215ENST00000486667 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
SRSF11-215ENST00000486667 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
SRSF11-215ENST00000486667 ABCC9O60706 1549 aa19.29■□□□□ 0.68
SRSF11-215ENST00000486667 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
SRSF11-215ENST00000486667 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
SRSF11-215ENST00000486667 NACADO15069 1562 aa19.13■□□□□ 0.65
SRSF11-215ENST00000486667 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
SRSF11-215ENST00000486667 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
SRSF11-215ENST00000486667 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
SRSF11-215ENST00000486667 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
SRSF11-215ENST00000486667 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
SRSF11-215ENST00000486667 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
SRSF11-215ENST00000486667 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
SRSF11-215ENST00000486667 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■■□ 19.7
SRSF11-215ENST00000486667 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
SRSF11-215ENST00000486667 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
SRSF11-215ENST00000486667 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
SRSF11-215ENST00000486667 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
SRSF11-215ENST00000486667 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
SRSF11-215ENST00000486667 WIZO95785 1651 aa17.93■□□□□ 0.46
SRSF11-215ENST00000486667 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
SRSF11-215ENST00000486667 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
SRSF11-215ENST00000486667 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
SRSF11-215ENST00000486667 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
SRSF11-215ENST00000486667 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
SRSF11-215ENST00000486667 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
SRSF11-215ENST00000486667 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
SRSF11-215ENST00000486667 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
SRSF11-215ENST00000486667 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
SRSF11-215ENST00000486667 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
SRSF11-215ENST00000486667 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
SRSF11-215ENST00000486667 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
SRSF11-215ENST00000486667 CFTRP13569 1480 aa17.2■□□□□ 0.34
SRSF11-215ENST00000486667 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
SRSF11-215ENST00000486667 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
SRSF11-215ENST00000486667 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
SRSF11-215ENST00000486667 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SRSF11-215ENST00000486667 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
SRSF11-215ENST00000486667 SYNJ1O43426 1573 aa17■□□□□ 0.31
SRSF11-215ENST00000486667 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
SRSF11-215ENST00000486667 BIVM-ERCC5R4GMW8 1640 aa16.99■□□□□ 0.31
SRSF11-215ENST00000486667 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SRSF11-215ENST00000486667 NESP48681 1621 aa16.92■□□□□ 0.3
SRSF11-215ENST00000486667 CUX1P39880 1505 aa16.91■□□□□ 0.3
SRSF11-215ENST00000486667 EEA1Q15075 1411 aa16.88■□□□□ 0.29
SRSF11-215ENST00000486667 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
SRSF11-215ENST00000486667 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
SRSF11-215ENST00000486667 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
SRSF11-215ENST00000486667 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
SRSF11-215ENST00000486667 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
SRSF11-215ENST00000486667 SOGA1O94964 1423 aa16.79■□□□□ 0.28
SRSF11-215ENST00000486667 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
SRSF11-215ENST00000486667 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
SRSF11-215ENST00000486667 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
SRSF11-215ENST00000486667 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
SRSF11-215ENST00000486667 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
SRSF11-215ENST00000486667 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
SRSF11-215ENST00000486667 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
SRSF11-215ENST00000486667 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
SRSF11-215ENST00000486667 KIF21BO75037 1637 aa16.66■□□□□ 0.26
SRSF11-215ENST00000486667 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
SRSF11-215ENST00000486667 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
SRSF11-215ENST00000486667 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
SRSF11-215ENST00000486667 WDR62O43379 1518 aa16.6■□□□□ 0.25
SRSF11-215ENST00000486667 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
SRSF11-215ENST00000486667 CUX2O14529 1486 aa16.59■□□□□ 0.25
SRSF11-215ENST00000486667 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
SRSF11-215ENST00000486667 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
SRSF11-215ENST00000486667 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SRSF11-215ENST00000486667 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
SRSF11-215ENST00000486667 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
SRSF11-215ENST00000486667 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
SRSF11-215ENST00000486667 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
SRSF11-215ENST00000486667 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
SRSF11-215ENST00000486667 IGF1RP08069 1367 aa16.51■□□□□ 0.23
SRSF11-215ENST00000486667 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
SRSF11-215ENST00000486667 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
SRSF11-215ENST00000486667 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
SRSF11-215ENST00000486667 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
SRSF11-215ENST00000486667 CUL7Q14999 1698 aa16.46■□□□□ 0.23
SRSF11-215ENST00000486667 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
SRSF11-215ENST00000486667 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
SRSF11-215ENST00000486667 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SRSF11-215ENST00000486667 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
SRSF11-215ENST00000486667 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
SRSF11-215ENST00000486667 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
SRSF11-215ENST00000486667 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
SRSF11-215ENST00000486667 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
SRSF11-215ENST00000486667 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■□□□ 11.7
SRSF11-215ENST00000486667 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
SRSF11-215ENST00000486667 CLIP1P30622 1438 aa16.29■□□□□ 0.2
SRSF11-215ENST00000486667 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
SRSF11-215ENST00000486667 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.19
SRSF11-215ENST00000486667 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
SRSF11-215ENST00000486667 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
SRSF11-215ENST00000486667 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
SRSF11-215ENST00000486667 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
SRSF11-215ENST00000486667 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms