RNA–Protein interactions for RNA: ENST00000472037.5

SCMH1-213, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-213ENST00000472037 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
SCMH1-213ENST00000472037 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
SCMH1-213ENST00000472037 ABCC9O60706 1549 aa23.1■■□□□ 1.29
SCMH1-213ENST00000472037 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.13
SCMH1-213ENST00000472037 NACADO15069 1562 aa21.95■■□□□ 1.1
SCMH1-213ENST00000472037 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
SCMH1-213ENST00000472037 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
SCMH1-213ENST00000472037 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
SCMH1-213ENST00000472037 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
SCMH1-213ENST00000472037 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
SCMH1-213ENST00000472037 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCMH1-213ENST00000472037 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
SCMH1-213ENST00000472037 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
SCMH1-213ENST00000472037 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
SCMH1-213ENST00000472037 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
SCMH1-213ENST00000472037 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
SCMH1-213ENST00000472037 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
SCMH1-213ENST00000472037 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
SCMH1-213ENST00000472037 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
SCMH1-213ENST00000472037 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
SCMH1-213ENST00000472037 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
SCMH1-213ENST00000472037 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
SCMH1-213ENST00000472037 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
SCMH1-213ENST00000472037 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
SCMH1-213ENST00000472037 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
SCMH1-213ENST00000472037 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
SCMH1-213ENST00000472037 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
SCMH1-213ENST00000472037 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
SCMH1-213ENST00000472037 CUX2O14529 1486 aa19.91■□□□□ 0.78
SCMH1-213ENST00000472037 NESP48681 1621 aa19.87■□□□□ 0.77
SCMH1-213ENST00000472037 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
SCMH1-213ENST00000472037 WIZO95785 1651 aa19.75■□□□□ 0.75
SCMH1-213ENST00000472037 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
SCMH1-213ENST00000472037 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
SCMH1-213ENST00000472037 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
SCMH1-213ENST00000472037 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
SCMH1-213ENST00000472037 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
SCMH1-213ENST00000472037 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
SCMH1-213ENST00000472037 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
SCMH1-213ENST00000472037 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
SCMH1-213ENST00000472037 WDR62O43379 1518 aa19.46■□□□□ 0.71
SCMH1-213ENST00000472037 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
SCMH1-213ENST00000472037 CFTRP13569 1480 aa19.41■□□□□ 0.7
SCMH1-213ENST00000472037 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
SCMH1-213ENST00000472037 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
SCMH1-213ENST00000472037 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.68
SCMH1-213ENST00000472037 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
SCMH1-213ENST00000472037 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
SCMH1-213ENST00000472037 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
SCMH1-213ENST00000472037 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
SCMH1-213ENST00000472037 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
SCMH1-213ENST00000472037 ABCC8Q09428 1581 aa19.02■□□□□ 0.63
SCMH1-213ENST00000472037 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
SCMH1-213ENST00000472037 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
SCMH1-213ENST00000472037 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
SCMH1-213ENST00000472037 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
SCMH1-213ENST00000472037 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
SCMH1-213ENST00000472037 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
SCMH1-213ENST00000472037 CHD1O14646 1710 aa18.81■□□□□ 0.6
SCMH1-213ENST00000472037 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
SCMH1-213ENST00000472037 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
SCMH1-213ENST00000472037 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
SCMH1-213ENST00000472037 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCMH1-213ENST00000472037 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
SCMH1-213ENST00000472037 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
SCMH1-213ENST00000472037 CUX1P39880 1505 aa18.75■□□□□ 0.59
SCMH1-213ENST00000472037 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
SCMH1-213ENST00000472037 SOGA1O94964 1423 aa18.73■□□□□ 0.59
SCMH1-213ENST00000472037 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
SCMH1-213ENST00000472037 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
SCMH1-213ENST00000472037 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
SCMH1-213ENST00000472037 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
SCMH1-213ENST00000472037 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
SCMH1-213ENST00000472037 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
SCMH1-213ENST00000472037 FBLN2P98095 1184 aa18.6■□□□□ 0.57
SCMH1-213ENST00000472037 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
SCMH1-213ENST00000472037 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
SCMH1-213ENST00000472037 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
SCMH1-213ENST00000472037 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
SCMH1-213ENST00000472037 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
SCMH1-213ENST00000472037 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
SCMH1-213ENST00000472037 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
SCMH1-213ENST00000472037 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
SCMH1-213ENST00000472037 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
SCMH1-213ENST00000472037 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
SCMH1-213ENST00000472037 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
SCMH1-213ENST00000472037 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
SCMH1-213ENST00000472037 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
SCMH1-213ENST00000472037 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
SCMH1-213ENST00000472037 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
SCMH1-213ENST00000472037 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
SCMH1-213ENST00000472037 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
SCMH1-213ENST00000472037 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
SCMH1-213ENST00000472037 NUP160Q12769 1436 aa18.29■□□□□ 0.52
SCMH1-213ENST00000472037 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
SCMH1-213ENST00000472037 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
SCMH1-213ENST00000472037 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
SCMH1-213ENST00000472037 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
SCMH1-213ENST00000472037 CUL7Q14999 1698 aa18.14■□□□□ 0.49
SCMH1-213ENST00000472037 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms