RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
FIRRE-201ENST00000427391 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
FIRRE-201ENST00000427391 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
FIRRE-201ENST00000427391 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
FIRRE-201ENST00000427391 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
FIRRE-201ENST00000427391 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
FIRRE-201ENST00000427391 ABCC9O60706 1549 aa19.99■□□□□ 0.79
FIRRE-201ENST00000427391 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
FIRRE-201ENST00000427391 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
FIRRE-201ENST00000427391 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
FIRRE-201ENST00000427391 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
FIRRE-201ENST00000427391 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
FIRRE-201ENST00000427391 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
FIRRE-201ENST00000427391 NACADO15069 1562 aa19.24■□□□□ 0.67
FIRRE-201ENST00000427391 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
FIRRE-201ENST00000427391 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
FIRRE-201ENST00000427391 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
FIRRE-201ENST00000427391 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
FIRRE-201ENST00000427391 TRIM41Q8WV44 630 aa19■□□□□ 0.63
FIRRE-201ENST00000427391 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
FIRRE-201ENST00000427391 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
FIRRE-201ENST00000427391 WIZO95785 1651 aa18.96■□□□□ 0.63
FIRRE-201ENST00000427391 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
FIRRE-201ENST00000427391 HRCP23327 699 aa18.87■□□□□ 0.61
FIRRE-201ENST00000427391 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
FIRRE-201ENST00000427391 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
FIRRE-201ENST00000427391 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
FIRRE-201ENST00000427391 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
FIRRE-201ENST00000427391 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
FIRRE-201ENST00000427391 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
FIRRE-201ENST00000427391 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
FIRRE-201ENST00000427391 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
FIRRE-201ENST00000427391 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
FIRRE-201ENST00000427391 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
FIRRE-201ENST00000427391 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
FIRRE-201ENST00000427391 SOGA1O94964 1423 aa18.33■□□□□ 0.53
FIRRE-201ENST00000427391 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
FIRRE-201ENST00000427391 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
FIRRE-201ENST00000427391 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
FIRRE-201ENST00000427391 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
FIRRE-201ENST00000427391 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
FIRRE-201ENST00000427391 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
FIRRE-201ENST00000427391 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
FIRRE-201ENST00000427391 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
FIRRE-201ENST00000427391 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
FIRRE-201ENST00000427391 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
FIRRE-201ENST00000427391 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
FIRRE-201ENST00000427391 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
FIRRE-201ENST00000427391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
FIRRE-201ENST00000427391 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
FIRRE-201ENST00000427391 EEA1Q15075 1411 aa18.02■□□□□ 0.48
FIRRE-201ENST00000427391 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
FIRRE-201ENST00000427391 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
FIRRE-201ENST00000427391 CCER1Q8TC90 406 aaPredicted RBP17.92■□□□□ 0.46
FIRRE-201ENST00000427391 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
FIRRE-201ENST00000427391 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
FIRRE-201ENST00000427391 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
FIRRE-201ENST00000427391 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
FIRRE-201ENST00000427391 KIF21BO75037 1637 aa17.82■□□□□ 0.44
FIRRE-201ENST00000427391 CLIP1P30622 1438 aa17.82■□□□□ 0.44
FIRRE-201ENST00000427391 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
FIRRE-201ENST00000427391 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
FIRRE-201ENST00000427391 CUX1P39880 1505 aa17.74■□□□□ 0.43
FIRRE-201ENST00000427391 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
FIRRE-201ENST00000427391 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
FIRRE-201ENST00000427391 CFTRP13569 1480 aa17.69■□□□□ 0.42
FIRRE-201ENST00000427391 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
FIRRE-201ENST00000427391 APLP2Q06481 763 aa17.64■□□□□ 0.41
FIRRE-201ENST00000427391 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
FIRRE-201ENST00000427391 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
FIRRE-201ENST00000427391 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
FIRRE-201ENST00000427391 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
FIRRE-201ENST00000427391 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
FIRRE-201ENST00000427391 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
FIRRE-201ENST00000427391 CUX2O14529 1486 aa17.51■□□□□ 0.39
FIRRE-201ENST00000427391 NESP48681 1621 aa17.46■□□□□ 0.39
FIRRE-201ENST00000427391 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
FIRRE-201ENST00000427391 IGF1RP08069 1367 aa17.46■□□□□ 0.39
FIRRE-201ENST00000427391 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
FIRRE-201ENST00000427391 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
FIRRE-201ENST00000427391 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
FIRRE-201ENST00000427391 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
FIRRE-201ENST00000427391 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
FIRRE-201ENST00000427391 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
FIRRE-201ENST00000427391 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
FIRRE-201ENST00000427391 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
FIRRE-201ENST00000427391 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
FIRRE-201ENST00000427391 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
FIRRE-201ENST00000427391 ITGAEP38570 1179 aa17.34■□□□□ 0.37
FIRRE-201ENST00000427391 MYT1Q01538 1121 aa17.33■□□□□ 0.36
FIRRE-201ENST00000427391 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.35
FIRRE-201ENST00000427391 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
FIRRE-201ENST00000427391 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
FIRRE-201ENST00000427391 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
FIRRE-201ENST00000427391 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
FIRRE-201ENST00000427391 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
FIRRE-201ENST00000427391 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
FIRRE-201ENST00000427391 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
FIRRE-201ENST00000427391 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
FIRRE-201ENST00000427391 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms