RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
SPG7-215ENST00000566682 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
SPG7-215ENST00000566682 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
SPG7-215ENST00000566682 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
SPG7-215ENST00000566682 ABCC9O60706 1549 aa28.69■■■□□ 2.18
SPG7-215ENST00000566682 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
SPG7-215ENST00000566682 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
SPG7-215ENST00000566682 NACADO15069 1562 aa27.6■■■□□ 2.01
SPG7-215ENST00000566682 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
SPG7-215ENST00000566682 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
SPG7-215ENST00000566682 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
SPG7-215ENST00000566682 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
SPG7-215ENST00000566682 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
SPG7-215ENST00000566682 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.898e-7■■■■□ 21.2
SPG7-215ENST00000566682 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
SPG7-215ENST00000566682 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
SPG7-215ENST00000566682 PHF23Q9BUL5 403 aaPredicted RBP26.67■■□□□ 1.86
SPG7-215ENST00000566682 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
SPG7-215ENST00000566682 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
SPG7-215ENST00000566682 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
SPG7-215ENST00000566682 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
SPG7-215ENST00000566682 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
SPG7-215ENST00000566682 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
SPG7-215ENST00000566682 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
SPG7-215ENST00000566682 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
SPG7-215ENST00000566682 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
SPG7-215ENST00000566682 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
SPG7-215ENST00000566682 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
SPG7-215ENST00000566682 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
SPG7-215ENST00000566682 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
SPG7-215ENST00000566682 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
SPG7-215ENST00000566682 WIZO95785 1651 aa25.26■■□□□ 1.63
SPG7-215ENST00000566682 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
SPG7-215ENST00000566682 FOXD1Q16676 465 aa25.23■■□□□ 1.63
SPG7-215ENST00000566682 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
SPG7-215ENST00000566682 NESP48681 1621 aa24.85■■□□□ 1.57
SPG7-215ENST00000566682 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
SPG7-215ENST00000566682 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
SPG7-215ENST00000566682 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
SPG7-215ENST00000566682 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
SPG7-215ENST00000566682 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
SPG7-215ENST00000566682 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
SPG7-215ENST00000566682 CFTRP13569 1480 aa24.59■■□□□ 1.53
SPG7-215ENST00000566682 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
SPG7-215ENST00000566682 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
SPG7-215ENST00000566682 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
SPG7-215ENST00000566682 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
SPG7-215ENST00000566682 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
SPG7-215ENST00000566682 CUX2O14529 1486 aa24.39■■□□□ 1.5
SPG7-215ENST00000566682 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
SPG7-215ENST00000566682 WDR62O43379 1518 aa24.26■■□□□ 1.47
SPG7-215ENST00000566682 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.46
SPG7-215ENST00000566682 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
SPG7-215ENST00000566682 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
SPG7-215ENST00000566682 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
SPG7-215ENST00000566682 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
SPG7-215ENST00000566682 CUX1P39880 1505 aa23.92■■□□□ 1.42
SPG7-215ENST00000566682 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
SPG7-215ENST00000566682 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
SPG7-215ENST00000566682 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
SPG7-215ENST00000566682 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
SPG7-215ENST00000566682 SOGA1O94964 1423 aa23.79■■□□□ 1.4
SPG7-215ENST00000566682 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
SPG7-215ENST00000566682 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
SPG7-215ENST00000566682 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
SPG7-215ENST00000566682 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
SPG7-215ENST00000566682 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
SPG7-215ENST00000566682 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
SPG7-215ENST00000566682 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
SPG7-215ENST00000566682 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.388e-9■■■□□ 19.2
SPG7-215ENST00000566682 MSH5O43196 834 aa23.66■■□□□ 1.38
SPG7-215ENST00000566682 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
SPG7-215ENST00000566682 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
SPG7-215ENST00000566682 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
SPG7-215ENST00000566682 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
SPG7-215ENST00000566682 PIAS4Q8N2W9 510 aaPredicted RBP23.56■■□□□ 1.36
SPG7-215ENST00000566682 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
SPG7-215ENST00000566682 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
SPG7-215ENST00000566682 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
SPG7-215ENST00000566682 GRIN2BQ13224 1484 aa23.48■■□□□ 1.35
SPG7-215ENST00000566682 PBRM1Q86U86 1689 aa23.47■■□□□ 1.35
SPG7-215ENST00000566682 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
SPG7-215ENST00000566682 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
SPG7-215ENST00000566682 ADRA2BP18089 450 aa23.41■■□□□ 1.34
SPG7-215ENST00000566682 CHD1O14646 1710 aa23.41■■□□□ 1.34
SPG7-215ENST00000566682 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
SPG7-215ENST00000566682 FBLN2P98095 1184 aa23.39■■□□□ 1.33
SPG7-215ENST00000566682 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
SPG7-215ENST00000566682 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
SPG7-215ENST00000566682 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
SPG7-215ENST00000566682 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
SPG7-215ENST00000566682 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
SPG7-215ENST00000566682 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
SPG7-215ENST00000566682 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
SPG7-215ENST00000566682 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
SPG7-215ENST00000566682 IGF1RP08069 1367 aa23.2■■□□□ 1.3
SPG7-215ENST00000566682 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
SPG7-215ENST00000566682 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
SPG7-215ENST00000566682 CUL7Q14999 1698 aa23.12■■□□□ 1.29
SPG7-215ENST00000566682 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms