RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-207ENST00000372597 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
SCMH1-207ENST00000372597 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
SCMH1-207ENST00000372597 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
SCMH1-207ENST00000372597 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
SCMH1-207ENST00000372597 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
SCMH1-207ENST00000372597 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
SCMH1-207ENST00000372597 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
SCMH1-207ENST00000372597 MYO15BQ96JP2 1530 aa17.6■□□□□ 0.41
SCMH1-207ENST00000372597 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
SCMH1-207ENST00000372597 HRCP23327 699 aa17.53■□□□□ 0.4
SCMH1-207ENST00000372597 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
SCMH1-207ENST00000372597 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
SCMH1-207ENST00000372597 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
SCMH1-207ENST00000372597 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
SCMH1-207ENST00000372597 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
SCMH1-207ENST00000372597 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
SCMH1-207ENST00000372597 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
SCMH1-207ENST00000372597 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
SCMH1-207ENST00000372597 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
SCMH1-207ENST00000372597 ABCC9O60706 1549 aa16.97■□□□□ 0.31
SCMH1-207ENST00000372597 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
SCMH1-207ENST00000372597 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
SCMH1-207ENST00000372597 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
SCMH1-207ENST00000372597 NACADO15069 1562 aa16.6■□□□□ 0.25
SCMH1-207ENST00000372597 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
SCMH1-207ENST00000372597 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
SCMH1-207ENST00000372597 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
SCMH1-207ENST00000372597 WIZO95785 1651 aa16.48■□□□□ 0.23
SCMH1-207ENST00000372597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
SCMH1-207ENST00000372597 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
SCMH1-207ENST00000372597 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
SCMH1-207ENST00000372597 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
SCMH1-207ENST00000372597 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
SCMH1-207ENST00000372597 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
SCMH1-207ENST00000372597 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
SCMH1-207ENST00000372597 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCMH1-207ENST00000372597 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
SCMH1-207ENST00000372597 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
SCMH1-207ENST00000372597 SOGA1O94964 1423 aa16.18■□□□□ 0.18
SCMH1-207ENST00000372597 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
SCMH1-207ENST00000372597 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
SCMH1-207ENST00000372597 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
SCMH1-207ENST00000372597 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
SCMH1-207ENST00000372597 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
SCMH1-207ENST00000372597 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
SCMH1-207ENST00000372597 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
SCMH1-207ENST00000372597 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
SCMH1-207ENST00000372597 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.17
SCMH1-207ENST00000372597 ACIN1Q9UKV3 1341 aaKnown RBP16.08■□□□□ 0.17
SCMH1-207ENST00000372597 EEA1Q15075 1411 aa16.08■□□□□ 0.16
SCMH1-207ENST00000372597 APLP2Q06481 763 aa16.07■□□□□ 0.16
SCMH1-207ENST00000372597 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
SCMH1-207ENST00000372597 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
SCMH1-207ENST00000372597 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
SCMH1-207ENST00000372597 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
SCMH1-207ENST00000372597 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
SCMH1-207ENST00000372597 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
SCMH1-207ENST00000372597 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
SCMH1-207ENST00000372597 CLIP1P30622 1438 aa15.91■□□□□ 0.14
SCMH1-207ENST00000372597 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
SCMH1-207ENST00000372597 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
SCMH1-207ENST00000372597 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
SCMH1-207ENST00000372597 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
SCMH1-207ENST00000372597 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
SCMH1-207ENST00000372597 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
SCMH1-207ENST00000372597 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.12
SCMH1-207ENST00000372597 MIER1Q8N108 512 aa15.77■□□□□ 0.11
SCMH1-207ENST00000372597 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
SCMH1-207ENST00000372597 KIF21BO75037 1637 aa15.72■□□□□ 0.11
SCMH1-207ENST00000372597 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
SCMH1-207ENST00000372597 ITGAEP38570 1179 aa15.65■□□□□ 0.1
SCMH1-207ENST00000372597 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
SCMH1-207ENST00000372597 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
SCMH1-207ENST00000372597 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
SCMH1-207ENST00000372597 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
SCMH1-207ENST00000372597 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
SCMH1-207ENST00000372597 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
SCMH1-207ENST00000372597 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
SCMH1-207ENST00000372597 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
SCMH1-207ENST00000372597 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
SCMH1-207ENST00000372597 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
SCMH1-207ENST00000372597 CUX1P39880 1505 aa15.42■□□□□ 0.06
SCMH1-207ENST00000372597 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
SCMH1-207ENST00000372597 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
SCMH1-207ENST00000372597 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
SCMH1-207ENST00000372597 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
SCMH1-207ENST00000372597 MYT1Q01538 1121 aa15.38■□□□□ 0.05
SCMH1-207ENST00000372597 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
SCMH1-207ENST00000372597 CUX2O14529 1486 aa15.36■□□□□ 0.05
SCMH1-207ENST00000372597 ARHGAP35Q9NRY4 1499 aa15.35■□□□□ 0.05
SCMH1-207ENST00000372597 CFTRP13569 1480 aa15.34■□□□□ 0.05
SCMH1-207ENST00000372597 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
SCMH1-207ENST00000372597 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
SCMH1-207ENST00000372597 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
SCMH1-207ENST00000372597 IGF1RP08069 1367 aa15.31■□□□□ 0.04
SCMH1-207ENST00000372597 SUPT16HQ9Y5B9 1047 aaKnown RBP15.28■□□□□ 0.04
SCMH1-207ENST00000372597 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.03
SCMH1-207ENST00000372597 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.03
SCMH1-207ENST00000372597 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
SCMH1-207ENST00000372597 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms