RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
SPG7-218ENST00000568205 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
SPG7-218ENST00000568205 ABCC9O60706 1549 aa31.8■■■□□ 2.68
SPG7-218ENST00000568205 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
SPG7-218ENST00000568205 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
SPG7-218ENST00000568205 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
SPG7-218ENST00000568205 NACADO15069 1562 aa30.84■■■□□ 2.53
SPG7-218ENST00000568205 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
SPG7-218ENST00000568205 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
SPG7-218ENST00000568205 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
SPG7-218ENST00000568205 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
SPG7-218ENST00000568205 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.361e-11■■■■■ 28.8
SPG7-218ENST00000568205 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
SPG7-218ENST00000568205 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
SPG7-218ENST00000568205 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
SPG7-218ENST00000568205 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
SPG7-218ENST00000568205 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
SPG7-218ENST00000568205 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
SPG7-218ENST00000568205 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
SPG7-218ENST00000568205 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
SPG7-218ENST00000568205 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
SPG7-218ENST00000568205 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
SPG7-218ENST00000568205 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
SPG7-218ENST00000568205 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SPG7-218ENST00000568205 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
SPG7-218ENST00000568205 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
SPG7-218ENST00000568205 WIZO95785 1651 aa28.42■■■□□ 2.14
SPG7-218ENST00000568205 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
SPG7-218ENST00000568205 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
SPG7-218ENST00000568205 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
SPG7-218ENST00000568205 TOP2AP11388 1531 aaKnown RBP28.19■■■□□ 2.1
SPG7-218ENST00000568205 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
SPG7-218ENST00000568205 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
SPG7-218ENST00000568205 NESP48681 1621 aa27.64■■■□□ 2.02
SPG7-218ENST00000568205 CFTRP13569 1480 aa27.62■■■□□ 2.01
SPG7-218ENST00000568205 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
SPG7-218ENST00000568205 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
SPG7-218ENST00000568205 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
SPG7-218ENST00000568205 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
SPG7-218ENST00000568205 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
SPG7-218ENST00000568205 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
SPG7-218ENST00000568205 KIF21AQ7Z4S6 1674 aa27.25■■□□□ 1.95
SPG7-218ENST00000568205 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
SPG7-218ENST00000568205 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
SPG7-218ENST00000568205 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
SPG7-218ENST00000568205 WDR62O43379 1518 aa27.03■■□□□ 1.92
SPG7-218ENST00000568205 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
SPG7-218ENST00000568205 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
SPG7-218ENST00000568205 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
SPG7-218ENST00000568205 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
SPG7-218ENST00000568205 CUX1P39880 1505 aa26.94■■□□□ 1.9
SPG7-218ENST00000568205 CUX2O14529 1486 aa26.9■■□□□ 1.9
SPG7-218ENST00000568205 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
SPG7-218ENST00000568205 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
SPG7-218ENST00000568205 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
SPG7-218ENST00000568205 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
SPG7-218ENST00000568205 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
SPG7-218ENST00000568205 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
SPG7-218ENST00000568205 SOGA1O94964 1423 aa26.68■■□□□ 1.86
SPG7-218ENST00000568205 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
SPG7-218ENST00000568205 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
SPG7-218ENST00000568205 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
SPG7-218ENST00000568205 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
SPG7-218ENST00000568205 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
SPG7-218ENST00000568205 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
SPG7-218ENST00000568205 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
SPG7-218ENST00000568205 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
SPG7-218ENST00000568205 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.821e-8■■■■□ 25.5
SPG7-218ENST00000568205 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
SPG7-218ENST00000568205 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
SPG7-218ENST00000568205 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
SPG7-218ENST00000568205 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
SPG7-218ENST00000568205 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
SPG7-218ENST00000568205 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
SPG7-218ENST00000568205 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
SPG7-218ENST00000568205 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
SPG7-218ENST00000568205 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
SPG7-218ENST00000568205 IGF1RP08069 1367 aa26.2■■□□□ 1.79
SPG7-218ENST00000568205 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
SPG7-218ENST00000568205 EEA1Q15075 1411 aa26.18■■□□□ 1.78
SPG7-218ENST00000568205 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
SPG7-218ENST00000568205 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
SPG7-218ENST00000568205 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
SPG7-218ENST00000568205 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
SPG7-218ENST00000568205 CSRNP3Q8WYN3 585 aa26.08■■□□□ 1.77
SPG7-218ENST00000568205 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
SPG7-218ENST00000568205 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
SPG7-218ENST00000568205 CUL7Q14999 1698 aa26.05■■□□□ 1.76
SPG7-218ENST00000568205 FBLN2P98095 1184 aa26.04■■□□□ 1.76
SPG7-218ENST00000568205 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
SPG7-218ENST00000568205 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
SPG7-218ENST00000568205 RAPGEF2Q9Y4G8 1499 aa25.94■■□□□ 1.74
SPG7-218ENST00000568205 CHD1O14646 1710 aa25.94■■□□□ 1.74
SPG7-218ENST00000568205 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
SPG7-218ENST00000568205 NUP160Q12769 1436 aa25.85■■□□□ 1.73
SPG7-218ENST00000568205 KIF21BO75037 1637 aa25.83■■□□□ 1.73
SPG7-218ENST00000568205 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
SPG7-218ENST00000568205 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
SPG7-218ENST00000568205 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
SPG7-218ENST00000568205 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms