Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB3BP20337 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAB3BP20337 AC011767.1-201ENST00000617410 1153 ntBASIC16.47■□□□□ 0.23
RAB3BP20337 AC231657.2-201ENST00000624556 255 ntBASIC16.47■□□□□ 0.23
RAB3BP20337 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB3BP20337 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAB3BP20337 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 AC124283.5-201ENST00000624661 1809 ntBASIC16.47■□□□□ 0.23
RAB3BP20337 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3BP20337 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3BP20337 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3BP20337 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAB3BP20337 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3BP20337 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB3BP20337 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
RAB3BP20337 AC007322.1-201ENST00000426983 750 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 AC034268.1-201ENST00000441047 882 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 AC093787.1-201ENST00000450396 207 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3BP20337 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB3BP20337 AC005181.1-201ENST00000604782 1256 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB3BP20337 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RAB3BP20337 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 LINC00896-202ENST00000609602 2128 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 AC134043.2-201ENST00000624206 2238 ntBASIC16.46■□□□□ 0.23
RAB3BP20337 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
RAB3BP20337 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3BP20337 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3BP20337 AC139713.2-201ENST00000641328 2723 ntBASIC16.46■□□□□ 0.22
RAB3BP20337 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.46■□□□□ 0.22
RAB3BP20337 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RAB3BP20337 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB3BP20337 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 TSPY21P-201ENST00000433481 731 ntBASIC16.45■□□□□ 0.22
RAB3BP20337 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB3BP20337 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.45■□□□□ 0.22
RAB3BP20337 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB3BP20337 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB3BP20337 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB3BP20337 PRORSD1P-202ENST00000563365 2154 ntBASIC16.45■□□□□ 0.22
RAB3BP20337 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB3BP20337 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3BP20337 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3BP20337 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3BP20337 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RAB3BP20337 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB3BP20337 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3BP20337 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB3BP20337 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3BP20337 RPS2P52-201ENST00000469610 820 ntBASIC16.44■□□□□ 0.22
RAB3BP20337 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms