RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 NISCHQ9Y2I1 1504 aa51.42■■■■■ 5.82
KHDC3L-201ENST00000370367 CCDC180Q9P1Z9 1646 aa45.88■■■■■ 4.93
KHDC3L-201ENST00000370367 ABCC9O60706 1549 aa45.22■■■■■ 4.83
KHDC3L-201ENST00000370367 RB1CC1Q8TDY2 1594 aa43.4■■■■■ 4.54
KHDC3L-201ENST00000370367 NACADO15069 1562 aa43.29■■■■■ 4.52
KHDC3L-201ENST00000370367 DCAF8L2P0C7V8 631 aa43.01■■■■■ 4.48
KHDC3L-201ENST00000370367 MYO15BQ96JP2 1530 aa42.98■■■■■ 4.47
KHDC3L-201ENST00000370367 ZCCHC6Q5VYS8 1495 aaKnown RBP42.76■■■■■ 4.44
KHDC3L-201ENST00000370367 DCAF1Q9Y4B6 1507 aa42.61■■■■■ 4.41
KHDC3L-201ENST00000370367 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
KHDC3L-201ENST00000370367 PABPN1Q86U42 306 aaKnown RBP eCLIP42.18■■■■■ 4.34
KHDC3L-201ENST00000370367 BICRAQ9NZM4 1560 aa42.05■■■■■ 4.32
KHDC3L-201ENST00000370367 DNAJC5BQ9UF47 199 aa41.88■■■■■ 4.29
KHDC3L-201ENST00000370367 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
KHDC3L-201ENST00000370367 SCRIBQ14160 1630 aa41.74■■■■■ 4.27
KHDC3L-201ENST00000370367 EIF4G1Q04637 1599 aaKnown RBP41■■■■■ 4.15
KHDC3L-201ENST00000370367 CC2D2AQ9P2K1 1620 aa40.89■■■■■ 4.14
KHDC3L-201ENST00000370367 CECR2Q9BXF3 1484 aa40.75■■■■■ 4.11
KHDC3L-201ENST00000370367 NCAPD3P42695 1498 aa39.97■■■■□ 3.99
KHDC3L-201ENST00000370367 SMARCA4P51532 1647 aa39.94■■■■□ 3.99
KHDC3L-201ENST00000370367 BAZ1AQ9NRL2 1556 aaPredicted RBP39.9■■■■□ 3.98
KHDC3L-201ENST00000370367 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
KHDC3L-201ENST00000370367 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
KHDC3L-201ENST00000370367 HMGXB3Q12766 1538 aa39.71■■■■□ 3.95
KHDC3L-201ENST00000370367 PEG3Q9GZU2 1588 aa39.64■■■■□ 3.94
KHDC3L-201ENST00000370367 MROH2BQ7Z745 1585 aa39.57■■■■□ 3.92
KHDC3L-201ENST00000370367 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
KHDC3L-201ENST00000370367 ERCC6Q03468 1493 aa39.06■■■■□ 3.84
KHDC3L-201ENST00000370367 WIZO95785 1651 aa39.06■■■■□ 3.84
KHDC3L-201ENST00000370367 RSF1Q96T23 1441 aaPredicted RBP39.02■■■■□ 3.84
KHDC3L-201ENST00000370367 NESP48681 1621 aa39■■■■□ 3.83
KHDC3L-201ENST00000370367 LAMC3Q9Y6N6 1575 aa38.94■■■■□ 3.82
KHDC3L-201ENST00000370367 CUX2O14529 1486 aa38.87■■■■□ 3.81
KHDC3L-201ENST00000370367 CADPSQ9ULU8 1353 aa38.77■■■■□ 3.8
KHDC3L-201ENST00000370367 PDS5BQ9NTI5 1447 aa38.73■■■■□ 3.79
KHDC3L-201ENST00000370367 TOP2AP11388 1531 aaKnown RBP38.73■■■■□ 3.79
KHDC3L-201ENST00000370367 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
KHDC3L-201ENST00000370367 KIF21AQ7Z4S6 1674 aa38.47■■■■□ 3.75
KHDC3L-201ENST00000370367 CFTRP13569 1480 aa38.45■■■■□ 3.75
KHDC3L-201ENST00000370367 MRC2Q9UBG0 1479 aa38.32■■■■□ 3.72
KHDC3L-201ENST00000370367 FANCD2Q9BXW9 1451 aa38.28■■■■□ 3.72
KHDC3L-201ENST00000370367 CEP164Q9UPV0 1460 aa38.28■■■■□ 3.72
KHDC3L-201ENST00000370367 CCDC88BA6NC98 1476 aa38.25■■■■□ 3.71
KHDC3L-201ENST00000370367 WDR62O43379 1518 aa38.21■■■■□ 3.71
KHDC3L-201ENST00000370367 DNAJC5Q9H3Z4 198 aa38.13■■■■□ 3.69
KHDC3L-201ENST00000370367 PRDM2Q13029 1718 aa37.98■■■■□ 3.67
KHDC3L-201ENST00000370367 URB2Q14146 1524 aaKnown RBP37.9■■■■□ 3.66
KHDC3L-201ENST00000370367 ABCC8Q09428 1581 aa37.67■■■■□ 3.62
KHDC3L-201ENST00000370367 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
KHDC3L-201ENST00000370367 SUPT5HO00267 1087 aaKnown RBP37.61■■■■□ 3.61
KHDC3L-201ENST00000370367 DNMBPQ6XZF7 1577 aa37.54■■■■□ 3.6
KHDC3L-201ENST00000370367 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
KHDC3L-201ENST00000370367 ZNF608Q9ULD9 1512 aaPredicted RBP37.31■■■■□ 3.56
KHDC3L-201ENST00000370367 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
KHDC3L-201ENST00000370367 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
KHDC3L-201ENST00000370367 OSCARQ8IYS5 282 aa37.16■■■■□ 3.54
KHDC3L-201ENST00000370367 CUX1P39880 1505 aa37.15■■■■□ 3.54
KHDC3L-201ENST00000370367 EIF4G3O43432 1585 aaKnown RBP37.14■■■■□ 3.54
KHDC3L-201ENST00000370367 SOGA1O94964 1423 aa37.11■■■■□ 3.53
KHDC3L-201ENST00000370367 FGD5Q6ZNL6 1462 aa37.1■■■■□ 3.53
KHDC3L-201ENST00000370367 RAD54L2Q9Y4B4 1467 aa37.07■■■■□ 3.52
KHDC3L-201ENST00000370367 AQRO60306 1485 aaKnown RBP eCLIP37.06■■■■□ 3.52
KHDC3L-201ENST00000370367 WDR97A6NE52 1622 aa37■■■■□ 3.51
KHDC3L-201ENST00000370367 TDRD9Q8NDG6 1382 aaKnown RBP36.93■■■■□ 3.5
KHDC3L-201ENST00000370367 WRNQ14191 1432 aaPredicted RBP eCLIP36.81■■■■□ 3.48
KHDC3L-201ENST00000370367 ABCA10Q8WWZ4 1543 aa36.78■■■■□ 3.48
KHDC3L-201ENST00000370367 GRIN2BQ13224 1484 aa36.76■■■■□ 3.48
KHDC3L-201ENST00000370367 TOP2BQ02880 1626 aa36.74■■■■□ 3.47
KHDC3L-201ENST00000370367 MAGI1Q96QZ7 1491 aaPredicted RBP36.73■■■■□ 3.47
KHDC3L-201ENST00000370367 SNAPC4Q5SXM2 1469 aa36.72■■■■□ 3.47
KHDC3L-201ENST00000370367 BIVM-ERCC5R4GMW8 1640 aa36.71■■■■□ 3.47
KHDC3L-201ENST00000370367 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
KHDC3L-201ENST00000370367 CHD1O14646 1710 aa36.67■■■■□ 3.46
KHDC3L-201ENST00000370367 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
KHDC3L-201ENST00000370367 FBLN2P98095 1184 aa36.66■■■■□ 3.46
KHDC3L-201ENST00000370367 ABCA5Q8WWZ7 1642 aa36.61■■■■□ 3.45
KHDC3L-201ENST00000370367 TRIM41Q8WV44 630 aa36.58■■■■□ 3.45
KHDC3L-201ENST00000370367 SYNJ2O15056 1496 aa36.57■■■■□ 3.45
KHDC3L-201ENST00000370367 CHMP7Q8WUX9 453 aaPredicted RBP36.57■■■■□ 3.44
KHDC3L-201ENST00000370367 ARHGEF11O15085 1522 aa36.52■■■■□ 3.44
KHDC3L-201ENST00000370367 PBRM1Q86U86 1689 aa36.51■■■■□ 3.44
KHDC3L-201ENST00000370367 RIMBP3CA6NJZ7 1639 aa36.51■■■■□ 3.43
KHDC3L-201ENST00000370367 RIMBP3BA6NNM3 1639 aa36.51■■■■□ 3.43
KHDC3L-201ENST00000370367 RIMBP3Q9UFD9 1639 aa36.51■■■■□ 3.43
KHDC3L-201ENST00000370367 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
KHDC3L-201ENST00000370367 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
KHDC3L-201ENST00000370367 ADAMTS12P58397 1594 aa36.3■■■■□ 3.4
KHDC3L-201ENST00000370367 FHAD1B1AJZ9 1412 aa36.28■■■■□ 3.4
KHDC3L-201ENST00000370367 GRIN2AQ12879 1464 aa36.27■■■■□ 3.4
KHDC3L-201ENST00000370367 ARAP1Q96P48 1450 aa36.19■■■■□ 3.38
KHDC3L-201ENST00000370367 CYB5RLQ6IPT4 315 aa36.17■■■■□ 3.38
KHDC3L-201ENST00000370367 NUP160Q12769 1436 aa36.17■■■■□ 3.38
KHDC3L-201ENST00000370367 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
KHDC3L-201ENST00000370367 CEP170Q5SW79 1584 aa36.05■■■■□ 3.36
KHDC3L-201ENST00000370367 IGF1RP08069 1367 aa35.99■■■■□ 3.35
KHDC3L-201ENST00000370367 CUL7Q14999 1698 aa35.88■■■■□ 3.33
KHDC3L-201ENST00000370367 SHROOM2Q13796 1616 aa35.87■■■■□ 3.33
KHDC3L-201ENST00000370367 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
KHDC3L-201ENST00000370367 ERCC6L2Q5T890 1561 aa35.76■■■■□ 3.32
KHDC3L-201ENST00000370367 CARMIL1Q5VZK9 1371 aa35.76■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms