RNA–Protein interactions for RNA: ENST00000471622.5

PCBP4-210, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5 BASIC

Gene PCBP4, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-210ENST00000471622 NISCHQ9Y2I1 1504 aa40.24■■■■■ 4.03
PCBP4-210ENST00000471622 CCDC180Q9P1Z9 1646 aa34.85■■■■□ 3.17
PCBP4-210ENST00000471622 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
PCBP4-210ENST00000471622 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.91
PCBP4-210ENST00000471622 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
PCBP4-210ENST00000471622 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
PCBP4-210ENST00000471622 MYO15BQ96JP2 1530 aa32.65■■■□□ 2.82
PCBP4-210ENST00000471622 ABCC9O60706 1549 aa32.57■■■□□ 2.8
PCBP4-210ENST00000471622 NACADO15069 1562 aa32.34■■■□□ 2.77
PCBP4-210ENST00000471622 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
PCBP4-210ENST00000471622 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
PCBP4-210ENST00000471622 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
PCBP4-210ENST00000471622 RSF1Q96T23 1441 aaPredicted RBP31.42■■■□□ 2.62
PCBP4-210ENST00000471622 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
PCBP4-210ENST00000471622 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
PCBP4-210ENST00000471622 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
PCBP4-210ENST00000471622 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
PCBP4-210ENST00000471622 BAZ1AQ9NRL2 1556 aaPredicted RBP31.03■■■□□ 2.56
PCBP4-210ENST00000471622 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
PCBP4-210ENST00000471622 WIZO95785 1651 aa30.91■■■□□ 2.54
PCBP4-210ENST00000471622 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
PCBP4-210ENST00000471622 PABPN1Q86U42 306 aaKnown RBP eCLIP30.83■■■□□ 2.53
PCBP4-210ENST00000471622 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
PCBP4-210ENST00000471622 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
PCBP4-210ENST00000471622 SMARCA2P51531 1590 aa30.32■■■□□ 2.45
PCBP4-210ENST00000471622 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
PCBP4-210ENST00000471622 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
PCBP4-210ENST00000471622 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
PCBP4-210ENST00000471622 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
PCBP4-210ENST00000471622 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
PCBP4-210ENST00000471622 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.38
PCBP4-210ENST00000471622 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
PCBP4-210ENST00000471622 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
PCBP4-210ENST00000471622 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
PCBP4-210ENST00000471622 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
PCBP4-210ENST00000471622 FAM9AQ8IZU1 332 aaPredicted RBP29.75■■■□□ 2.35
PCBP4-210ENST00000471622 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
PCBP4-210ENST00000471622 CC2D2AQ9P2K1 1620 aa29.47■■■□□ 2.31
PCBP4-210ENST00000471622 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
PCBP4-210ENST00000471622 EEA1Q15075 1411 aa29.4■■■□□ 2.3
PCBP4-210ENST00000471622 SOGA1O94964 1423 aa29.37■■■□□ 2.29
PCBP4-210ENST00000471622 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
PCBP4-210ENST00000471622 CFTRP13569 1480 aa29.33■■■□□ 2.29
PCBP4-210ENST00000471622 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
PCBP4-210ENST00000471622 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
PCBP4-210ENST00000471622 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
PCBP4-210ENST00000471622 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
PCBP4-210ENST00000471622 CSRNP3Q8WYN3 585 aa29.21■■■□□ 2.27
PCBP4-210ENST00000471622 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
PCBP4-210ENST00000471622 PCGF6Q9BYE7 350 aa29.11■■■□□ 2.25
PCBP4-210ENST00000471622 CUX1P39880 1505 aa29.07■■■□□ 2.24
PCBP4-210ENST00000471622 GOLGA3Q08378 1498 aa29.03■■■□□ 2.24
PCBP4-210ENST00000471622 TNIKQ9UKE5 1360 aa29.03■■■□□ 2.24
PCBP4-210ENST00000471622 KIF21BO75037 1637 aa29■■■□□ 2.23
PCBP4-210ENST00000471622 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
PCBP4-210ENST00000471622 TRIM26Q12899 539 aaPredicted RBP28.96■■■□□ 2.23
PCBP4-210ENST00000471622 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
PCBP4-210ENST00000471622 UBTFP17480 764 aaKnown RBP28.9■■■□□ 2.22
PCBP4-210ENST00000471622 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
PCBP4-210ENST00000471622 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
PCBP4-210ENST00000471622 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
PCBP4-210ENST00000471622 RAPGEF2Q9Y4G8 1499 aa28.75■■■□□ 2.19
PCBP4-210ENST00000471622 NESP48681 1621 aa28.74■■■□□ 2.19
PCBP4-210ENST00000471622 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
PCBP4-210ENST00000471622 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
PCBP4-210ENST00000471622 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
PCBP4-210ENST00000471622 HRCP23327 699 aa28.66■■■□□ 2.18
PCBP4-210ENST00000471622 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
PCBP4-210ENST00000471622 CUX2O14529 1486 aa28.61■■■□□ 2.17
PCBP4-210ENST00000471622 CLIP1P30622 1438 aa28.59■■■□□ 2.17
PCBP4-210ENST00000471622 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
PCBP4-210ENST00000471622 PDS5BQ9NTI5 1447 aa28.54■■■□□ 2.16
PCBP4-210ENST00000471622 PPARGC1BQ86YN6 1023 aaKnown RBP28.52■■■□□ 2.16
PCBP4-210ENST00000471622 POLA1P09884 1462 aaPredicted RBP28.47■■■□□ 2.15
PCBP4-210ENST00000471622 IGF1RP08069 1367 aa28.46■■■□□ 2.15
PCBP4-210ENST00000471622 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
PCBP4-210ENST00000471622 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
PCBP4-210ENST00000471622 KIF21AQ7Z4S6 1674 aa28.4■■■□□ 2.14
PCBP4-210ENST00000471622 VPS8Q8N3P4 1428 aa28.4■■■□□ 2.14
PCBP4-210ENST00000471622 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
PCBP4-210ENST00000471622 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
PCBP4-210ENST00000471622 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
PCBP4-210ENST00000471622 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
PCBP4-210ENST00000471622 ARAP1Q96P48 1450 aa28.24■■■□□ 2.11
PCBP4-210ENST00000471622 TTBK1Q5TCY1 1321 aaPredicted RBP28.21■■■□□ 2.11
PCBP4-210ENST00000471622 CUL7Q14999 1698 aa28.21■■■□□ 2.11
PCBP4-210ENST00000471622 APLP2Q06481 763 aa28.17■■■□□ 2.1
PCBP4-210ENST00000471622 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
PCBP4-210ENST00000471622 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
PCBP4-210ENST00000471622 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.1
PCBP4-210ENST00000471622 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
PCBP4-210ENST00000471622 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
PCBP4-210ENST00000471622 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
PCBP4-210ENST00000471622 ZEB1P37275 1124 aaPredicted RBP28.07■■■□□ 2.08
PCBP4-210ENST00000471622 CTTNBP2Q8WZ74 1663 aa27.98■■■□□ 2.07
PCBP4-210ENST00000471622 WDR62O43379 1518 aa27.96■■■□□ 2.07
PCBP4-210ENST00000471622 ERCC6Q03468 1493 aa27.95■■■□□ 2.06
PCBP4-210ENST00000471622 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
PCBP4-210ENST00000471622 EFCAB5A4FU69 1503 aa27.89■■■□□ 2.06
PCBP4-210ENST00000471622 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms