RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
PABPC1L-217ENST00000537323 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
PABPC1L-217ENST00000537323 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
PABPC1L-217ENST00000537323 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.68
PABPC1L-217ENST00000537323 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
PABPC1L-217ENST00000537323 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
PABPC1L-217ENST00000537323 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
PABPC1L-217ENST00000537323 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
PABPC1L-217ENST00000537323 CHIC1Q5VXU3 224 aa30.28■■■□□ 2.44
PABPC1L-217ENST00000537323 ABCC9O60706 1549 aa30.19■■■□□ 2.42
PABPC1L-217ENST00000537323 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
PABPC1L-217ENST00000537323 NACADO15069 1562 aa30.02■■■□□ 2.4
PABPC1L-217ENST00000537323 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
PABPC1L-217ENST00000537323 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
PABPC1L-217ENST00000537323 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
PABPC1L-217ENST00000537323 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
PABPC1L-217ENST00000537323 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.27
PABPC1L-217ENST00000537323 WIZO95785 1651 aa29.19■■■□□ 2.26
PABPC1L-217ENST00000537323 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
PABPC1L-217ENST00000537323 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
PABPC1L-217ENST00000537323 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
PABPC1L-217ENST00000537323 HRCP23327 699 aa29.02■■■□□ 2.24
PABPC1L-217ENST00000537323 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
PABPC1L-217ENST00000537323 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
PABPC1L-217ENST00000537323 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
PABPC1L-217ENST00000537323 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
PABPC1L-217ENST00000537323 TRIM26Q12899 539 aaPredicted RBP28.69■■■□□ 2.18
PABPC1L-217ENST00000537323 FAM9AQ8IZU1 332 aaPredicted RBP28.67■■■□□ 2.18
PABPC1L-217ENST00000537323 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PABPC1L-217ENST00000537323 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
PABPC1L-217ENST00000537323 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
PABPC1L-217ENST00000537323 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
PABPC1L-217ENST00000537323 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.142e-8■■□□□ 11.6
PABPC1L-217ENST00000537323 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
PABPC1L-217ENST00000537323 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
PABPC1L-217ENST00000537323 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
PABPC1L-217ENST00000537323 EEA1Q15075 1411 aa28.16■■■□□ 2.1
PABPC1L-217ENST00000537323 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
PABPC1L-217ENST00000537323 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
PABPC1L-217ENST00000537323 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
PABPC1L-217ENST00000537323 SOGA1O94964 1423 aa28.05■■■□□ 2.08
PABPC1L-217ENST00000537323 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
PABPC1L-217ENST00000537323 TNIKQ9UKE5 1360 aa27.96■■■□□ 2.07
PABPC1L-217ENST00000537323 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
PABPC1L-217ENST00000537323 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
PABPC1L-217ENST00000537323 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
PABPC1L-217ENST00000537323 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
PABPC1L-217ENST00000537323 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
PABPC1L-217ENST00000537323 KIF21BO75037 1637 aa27.77■■■□□ 2.04
PABPC1L-217ENST00000537323 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
PABPC1L-217ENST00000537323 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
PABPC1L-217ENST00000537323 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
PABPC1L-217ENST00000537323 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
PABPC1L-217ENST00000537323 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
PABPC1L-217ENST00000537323 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
PABPC1L-217ENST00000537323 CLIP1P30622 1438 aa27.46■■□□□ 1.99
PABPC1L-217ENST00000537323 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
PABPC1L-217ENST00000537323 CCER1Q8TC90 406 aaPredicted RBP27.41■■□□□ 1.98
PABPC1L-217ENST00000537323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.4■■□□□ 1.98
PABPC1L-217ENST00000537323 CFTRP13569 1480 aa27.39■■□□□ 1.98
PABPC1L-217ENST00000537323 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
PABPC1L-217ENST00000537323 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 CUX1P39880 1505 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
PABPC1L-217ENST00000537323 TTBK1Q5TCY1 1321 aaPredicted RBP27.35■■□□□ 1.97
PABPC1L-217ENST00000537323 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
PABPC1L-217ENST00000537323 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
PABPC1L-217ENST00000537323 APLP2Q06481 763 aa27.16■■□□□ 1.94
PABPC1L-217ENST00000537323 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
PABPC1L-217ENST00000537323 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
PABPC1L-217ENST00000537323 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
PABPC1L-217ENST00000537323 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
PABPC1L-217ENST00000537323 CUX2O14529 1486 aa26.93■■□□□ 1.9
PABPC1L-217ENST00000537323 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
PABPC1L-217ENST00000537323 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
PABPC1L-217ENST00000537323 IGF1RP08069 1367 aa26.86■■□□□ 1.89
PABPC1L-217ENST00000537323 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
PABPC1L-217ENST00000537323 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
PABPC1L-217ENST00000537323 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
PABPC1L-217ENST00000537323 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
PABPC1L-217ENST00000537323 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
PABPC1L-217ENST00000537323 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 RRBP1Q9P2E9 1410 aaKnown RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
PABPC1L-217ENST00000537323 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
PABPC1L-217ENST00000537323 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
PABPC1L-217ENST00000537323 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
PABPC1L-217ENST00000537323 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
PABPC1L-217ENST00000537323 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
PABPC1L-217ENST00000537323 TIAM1Q13009 1591 aa26.59■■□□□ 1.85
PABPC1L-217ENST00000537323 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
PABPC1L-217ENST00000537323 CUL7Q14999 1698 aa26.57■■□□□ 1.84
PABPC1L-217ENST00000537323 NESP48681 1621 aa26.57■■□□□ 1.84
PABPC1L-217ENST00000537323 CCNB3Q8WWL7 1395 aa26.56■■□□□ 1.84
PABPC1L-217ENST00000537323 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
PABPC1L-217ENST00000537323 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
PABPC1L-217ENST00000537323 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
PABPC1L-217ENST00000537323 DHX57Q6P158 1386 aaKnown RBP26.52■■□□□ 1.84
PABPC1L-217ENST00000537323 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
PABPC1L-217ENST00000537323 CFAP43Q8NDM7 1665 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms