RNA–Protein interactions for RNA: ENST00000417339.2

CENPVL3-201, Transcript of centromere protein V like 3, humanhuman

APPRIS P1 BASIC

Gene CENPVL3, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3-201ENST00000417339 NISCHQ9Y2I1 1504 aa53.49■■■■■ 6.15
CENPVL3-201ENST00000417339 CCDC180Q9P1Z9 1646 aa47.85■■■■■ 5.25
CENPVL3-201ENST00000417339 ABCC9O60706 1549 aa47.73■■■■■ 5.23
CENPVL3-201ENST00000417339 RB1CC1Q8TDY2 1594 aa45.41■■■■■ 4.86
CENPVL3-201ENST00000417339 NACADO15069 1562 aa45.16■■■■■ 4.82
CENPVL3-201ENST00000417339 DCAF8L2P0C7V8 631 aa45.13■■■■■ 4.82
CENPVL3-201ENST00000417339 DNAJC5BQ9UF47 199 aa44.63■■■■■ 4.74
CENPVL3-201ENST00000417339 UNC13AQ9UPW8 1703 aa44.59■■■■■ 4.73
CENPVL3-201ENST00000417339 MYO15BQ96JP2 1530 aa44.54■■■■■ 4.72
CENPVL3-201ENST00000417339 PABPN1Q86U42 306 aaKnown RBP eCLIP44.52■■■■■ 4.72
CENPVL3-201ENST00000417339 ZCCHC6Q5VYS8 1495 aaKnown RBP44.38■■■■■ 4.69
CENPVL3-201ENST00000417339 BICRAQ9NZM4 1560 aa44.21■■■■■ 4.67
CENPVL3-201ENST00000417339 DCAF1Q9Y4B6 1507 aa44.1■■■■■ 4.65
CENPVL3-201ENST00000417339 SCRIBQ14160 1630 aa43.74■■■■■ 4.59
CENPVL3-201ENST00000417339 SHROOM4Q9ULL8 1493 aa43.38■■■■■ 4.53
CENPVL3-201ENST00000417339 CC2D2AQ9P2K1 1620 aa43.11■■■■■ 4.49
CENPVL3-201ENST00000417339 EIF4G1Q04637 1599 aaKnown RBP43.04■■■■■ 4.48
CENPVL3-201ENST00000417339 CECR2Q9BXF3 1484 aa42.9■■■■■ 4.46
CENPVL3-201ENST00000417339 SMARCA4P51532 1647 aa41.7■■■■■ 4.27
CENPVL3-201ENST00000417339 NCAPD3P42695 1498 aa41.69■■■■■ 4.26
CENPVL3-201ENST00000417339 ATAD2BQ9ULI0 1458 aa41.66■■■■■ 4.26
CENPVL3-201ENST00000417339 SMARCA2P51531 1590 aa41.49■■■■■ 4.23
CENPVL3-201ENST00000417339 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
CENPVL3-201ENST00000417339 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
CENPVL3-201ENST00000417339 MROH2BQ7Z745 1585 aa41.29■■■■■ 4.2
CENPVL3-201ENST00000417339 BAZ1BQ9UIG0 1483 aaKnown RBP41.24■■■■■ 4.19
CENPVL3-201ENST00000417339 PEG3Q9GZU2 1588 aa41.22■■■■■ 4.19
CENPVL3-201ENST00000417339 NESP48681 1621 aa41.11■■■■■ 4.17
CENPVL3-201ENST00000417339 ERCC6Q03468 1493 aa41.09■■■■■ 4.17
CENPVL3-201ENST00000417339 CUX2O14529 1486 aa40.88■■■■■ 4.13
CENPVL3-201ENST00000417339 WIZO95785 1651 aa40.85■■■■■ 4.13
CENPVL3-201ENST00000417339 LAMC3Q9Y6N6 1575 aa40.71■■■■■ 4.11
CENPVL3-201ENST00000417339 DNAJC5Q9H3Z4 198 aa40.64■■■■■ 4.1
CENPVL3-201ENST00000417339 KIF21AQ7Z4S6 1674 aa40.59■■■■■ 4.09
CENPVL3-201ENST00000417339 THOC2Q8NI27 1593 aaKnown RBP40.57■■■■■ 4.09
CENPVL3-201ENST00000417339 RSF1Q96T23 1441 aaPredicted RBP40.49■■■■■ 4.07
CENPVL3-201ENST00000417339 CADPSQ9ULU8 1353 aa40.46■■■■■ 4.07
CENPVL3-201ENST00000417339 PDS5BQ9NTI5 1447 aa40.44■■■■■ 4.06
CENPVL3-201ENST00000417339 TOP2AP11388 1531 aaKnown RBP40.24■■■■■ 4.03
CENPVL3-201ENST00000417339 MRC2Q9UBG0 1479 aa40.13■■■■■ 4.02
CENPVL3-201ENST00000417339 CFTRP13569 1480 aa40.05■■■■■ 4
CENPVL3-201ENST00000417339 WDR62O43379 1518 aa40.03■■■■■ 4
CENPVL3-201ENST00000417339 FANCD2Q9BXW9 1451 aa40.03■■■■■ 4
CENPVL3-201ENST00000417339 CEP164Q9UPV0 1460 aa40.01■■■■■ 4
CENPVL3-201ENST00000417339 CCDC88BA6NC98 1476 aa39.83■■■■□ 3.97
CENPVL3-201ENST00000417339 PRDM2Q13029 1718 aa39.74■■■■□ 3.95
CENPVL3-201ENST00000417339 URB2Q14146 1524 aaKnown RBP39.73■■■■□ 3.95
CENPVL3-201ENST00000417339 TOPBP1Q92547 1522 aa39.32■■■■□ 3.89
CENPVL3-201ENST00000417339 ZNF608Q9ULD9 1512 aaPredicted RBP39.23■■■■□ 3.87
CENPVL3-201ENST00000417339 IFT140Q96RY7 1462 aa39.18■■■■□ 3.86
CENPVL3-201ENST00000417339 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
CENPVL3-201ENST00000417339 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
CENPVL3-201ENST00000417339 OSCARQ8IYS5 282 aa39.09■■■■□ 3.85
CENPVL3-201ENST00000417339 TRIM41Q8WV44 630 aa39.06■■■■□ 3.84
CENPVL3-201ENST00000417339 EIF4G3O43432 1585 aaKnown RBP38.98■■■■□ 3.83
CENPVL3-201ENST00000417339 SUPT5HO00267 1087 aaKnown RBP38.97■■■■□ 3.83
CENPVL3-201ENST00000417339 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
CENPVL3-201ENST00000417339 POLA1P09884 1462 aaPredicted RBP38.92■■■■□ 3.82
CENPVL3-201ENST00000417339 AQRO60306 1485 aaKnown RBP eCLIP38.89■■■■□ 3.82
CENPVL3-201ENST00000417339 RAD54L2Q9Y4B4 1467 aa38.86■■■■□ 3.81
CENPVL3-201ENST00000417339 CUX1P39880 1505 aa38.78■■■■□ 3.8
CENPVL3-201ENST00000417339 SOGA1O94964 1423 aa38.74■■■■□ 3.79
CENPVL3-201ENST00000417339 FGD5Q6ZNL6 1462 aa38.73■■■■□ 3.79
CENPVL3-201ENST00000417339 CHD1O14646 1710 aa38.72■■■■□ 3.79
CENPVL3-201ENST00000417339 TDRD9Q8NDG6 1382 aaKnown RBP38.69■■■■□ 3.78
CENPVL3-201ENST00000417339 RIMBP3CA6NJZ7 1639 aa38.66■■■■□ 3.78
CENPVL3-201ENST00000417339 RIMBP3BA6NNM3 1639 aa38.66■■■■□ 3.78
CENPVL3-201ENST00000417339 RIMBP3Q9UFD9 1639 aa38.66■■■■□ 3.78
CENPVL3-201ENST00000417339 FBLN2P98095 1184 aa38.56■■■■□ 3.76
CENPVL3-201ENST00000417339 ARHGEF11O15085 1522 aa38.52■■■■□ 3.76
CENPVL3-201ENST00000417339 WDR97A6NE52 1622 aa38.47■■■■□ 3.75
CENPVL3-201ENST00000417339 SNAPC4Q5SXM2 1469 aa38.47■■■■□ 3.75
CENPVL3-201ENST00000417339 GRIN2BQ13224 1484 aa38.34■■■■□ 3.73
CENPVL3-201ENST00000417339 PBRM1Q86U86 1689 aa38.31■■■■□ 3.72
CENPVL3-201ENST00000417339 MAGI1Q96QZ7 1491 aaPredicted RBP38.29■■■■□ 3.72
CENPVL3-201ENST00000417339 GAPVD1Q14C86 1478 aa38.27■■■■□ 3.72
CENPVL3-201ENST00000417339 CHMP7Q8WUX9 453 aaPredicted RBP38.26■■■■□ 3.72
CENPVL3-201ENST00000417339 ABCA10Q8WWZ4 1543 aa38.26■■■■□ 3.72
CENPVL3-201ENST00000417339 CYB5RLQ6IPT4 315 aa38.25■■■■□ 3.71
CENPVL3-201ENST00000417339 ABCA5Q8WWZ7 1642 aa38.22■■■■□ 3.71
CENPVL3-201ENST00000417339 SYNJ1O43426 1573 aa38.2■■■■□ 3.71
CENPVL3-201ENST00000417339 CLASP1Q7Z460 1538 aa38.19■■■■□ 3.7
CENPVL3-201ENST00000417339 ARAP1Q96P48 1450 aa38.19■■■■□ 3.7
CENPVL3-201ENST00000417339 SYNJ2O15056 1496 aa38.18■■■■□ 3.7
CENPVL3-201ENST00000417339 BIVM-ERCC5R4GMW8 1640 aa38.18■■■■□ 3.7
CENPVL3-201ENST00000417339 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
CENPVL3-201ENST00000417339 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
CENPVL3-201ENST00000417339 ADAMTS12P58397 1594 aa37.92■■■■□ 3.66
CENPVL3-201ENST00000417339 GRIN2AQ12879 1464 aa37.87■■■■□ 3.65
CENPVL3-201ENST00000417339 CEP170Q5SW79 1584 aa37.8■■■■□ 3.64
CENPVL3-201ENST00000417339 FHAD1B1AJZ9 1412 aa37.76■■■■□ 3.63
CENPVL3-201ENST00000417339 ERICH3Q5RHP9 1530 aa37.76■■■■□ 3.63
CENPVL3-201ENST00000417339 ERCC6L2Q5T890 1561 aa37.73■■■■□ 3.63
CENPVL3-201ENST00000417339 NUP160Q12769 1436 aa37.73■■■■□ 3.63
CENPVL3-201ENST00000417339 TRHP20396 242 aaPredicted RBP37.72■■■■□ 3.63
CENPVL3-201ENST00000417339 SHROOM2Q13796 1616 aa37.56■■■■□ 3.6
CENPVL3-201ENST00000417339 IGF1RP08069 1367 aa37.41■■■■□ 3.58
CENPVL3-201ENST00000417339 KIF27Q86VH2 1401 aa37.38■■■■□ 3.57
CENPVL3-201ENST00000417339 PRG4Q92954 1404 aaPredicted RBP37.37■■■■□ 3.57
CENPVL3-201ENST00000417339 RUSC2Q8N2Y8 1516 aa37.37■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms