RNA–Protein interactions for RNA: ENST00000223215.8

MEST-201, mesoderm specific transcript, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MEST, Length 2,465 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-201ENST00000223215 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
MEST-201ENST00000223215 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
MEST-201ENST00000223215 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
MEST-201ENST00000223215 ZCCHC6Q5VYS8 1495 aaKnown RBP33.2■■■□□ 2.91
MEST-201ENST00000223215 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
MEST-201ENST00000223215 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
MEST-201ENST00000223215 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.76
MEST-201ENST00000223215 ABCC9O60706 1549 aa32.15■■■□□ 2.74
MEST-201ENST00000223215 SCRIBQ14160 1630 aa31.7■■■□□ 2.67
MEST-201ENST00000223215 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
MEST-201ENST00000223215 NACADO15069 1562 aa31.53■■■□□ 2.64
MEST-201ENST00000223215 RB1CC1Q8TDY2 1594 aa31.21■■■□□ 2.59
MEST-201ENST00000223215 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
MEST-201ENST00000223215 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
MEST-201ENST00000223215 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
MEST-201ENST00000223215 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
MEST-201ENST00000223215 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
MEST-201ENST00000223215 PABPN1Q86U42 306 aaKnown RBP eCLIP30.65■■■□□ 2.5
MEST-201ENST00000223215 WIZO95785 1651 aa30.47■■■□□ 2.47
MEST-201ENST00000223215 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
MEST-201ENST00000223215 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
MEST-201ENST00000223215 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
MEST-201ENST00000223215 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
MEST-201ENST00000223215 LOC105371045A0A1W2PR82 267 aa30.03■■■□□ 2.4
MEST-201ENST00000223215 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
MEST-201ENST00000223215 FAM9AQ8IZU1 332 aaPredicted RBP29.86■■■□□ 2.37
MEST-201ENST00000223215 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
MEST-201ENST00000223215 SMARCA2P51531 1590 aa29.76■■■□□ 2.36
MEST-201ENST00000223215 EHMT2Q96KQ7 1210 aa29.68■■■□□ 2.34
MEST-201ENST00000223215 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
MEST-201ENST00000223215 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
MEST-201ENST00000223215 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
MEST-201ENST00000223215 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
MEST-201ENST00000223215 PCGF6Q9BYE7 350 aa29.54■■■□□ 2.32
MEST-201ENST00000223215 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
MEST-201ENST00000223215 HRCP23327 699 aa29.27■■■□□ 2.28
MEST-201ENST00000223215 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
MEST-201ENST00000223215 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
MEST-201ENST00000223215 SOGA1O94964 1423 aa29.12■■■□□ 2.25
MEST-201ENST00000223215 HMGXB3Q12766 1538 aa29.09■■■□□ 2.25
MEST-201ENST00000223215 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
MEST-201ENST00000223215 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
MEST-201ENST00000223215 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.23
MEST-201ENST00000223215 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
MEST-201ENST00000223215 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
MEST-201ENST00000223215 TRIM26Q12899 539 aaPredicted RBP28.84■■■□□ 2.21
MEST-201ENST00000223215 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
MEST-201ENST00000223215 EEA1Q15075 1411 aa28.77■■■□□ 2.2
MEST-201ENST00000223215 CFTRP13569 1480 aa28.74■■■□□ 2.19
MEST-201ENST00000223215 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
MEST-201ENST00000223215 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
MEST-201ENST00000223215 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
MEST-201ENST00000223215 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
MEST-201ENST00000223215 CUX1P39880 1505 aa28.59■■■□□ 2.17
MEST-201ENST00000223215 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
MEST-201ENST00000223215 BIVM-ERCC5R4GMW8 1640 aa28.56■■■□□ 2.16
MEST-201ENST00000223215 RANGAP1P46060 587 aaPredicted RBP28.51■■■□□ 2.15
MEST-201ENST00000223215 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
MEST-201ENST00000223215 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
MEST-201ENST00000223215 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
MEST-201ENST00000223215 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
MEST-201ENST00000223215 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
MEST-201ENST00000223215 NESP48681 1621 aa28.4■■■□□ 2.14
MEST-201ENST00000223215 KIF21BO75037 1637 aa28.39■■■□□ 2.14
MEST-201ENST00000223215 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
MEST-201ENST00000223215 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
MEST-201ENST00000223215 CLIP1P30622 1438 aa28.25■■■□□ 2.11
MEST-201ENST00000223215 FGD5Q6ZNL6 1462 aa28.22■■■□□ 2.11
MEST-201ENST00000223215 CUX2O14529 1486 aa28.21■■■□□ 2.11
MEST-201ENST00000223215 PRXQ9BXM0 1461 aa28.19■■■□□ 2.1
MEST-201ENST00000223215 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
MEST-201ENST00000223215 IGF1RP08069 1367 aa28.07■■■□□ 2.08
MEST-201ENST00000223215 RAD54L2Q9Y4B4 1467 aa28.07■■■□□ 2.08
MEST-201ENST00000223215 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
MEST-201ENST00000223215 TOPBP1Q92547 1522 aa28.05■■■□□ 2.08
MEST-201ENST00000223215 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
MEST-201ENST00000223215 VPS8Q8N3P4 1428 aa27.99■■■□□ 2.07
MEST-201ENST00000223215 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
MEST-201ENST00000223215 APLP2Q06481 763 aa27.98■■■□□ 2.07
MEST-201ENST00000223215 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
MEST-201ENST00000223215 PDS5BQ9NTI5 1447 aa27.96■■■□□ 2.07
MEST-201ENST00000223215 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
MEST-201ENST00000223215 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
MEST-201ENST00000223215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
MEST-201ENST00000223215 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
MEST-201ENST00000223215 ABCA10Q8WWZ4 1543 aa27.84■■■□□ 2.05
MEST-201ENST00000223215 ARAP1Q96P48 1450 aa27.83■■■□□ 2.05
MEST-201ENST00000223215 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
MEST-201ENST00000223215 CCER1Q8TC90 406 aaPredicted RBP27.75■■■□□ 2.03
MEST-201ENST00000223215 ARHGAP35Q9NRY4 1499 aa27.74■■■□□ 2.03
MEST-201ENST00000223215 P3H3Q8IVL6 736 aa27.73■■■□□ 2.03
MEST-201ENST00000223215 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
MEST-201ENST00000223215 KANK4Q5T7N3 995 aaPredicted RBP27.68■■■□□ 2.02
MEST-201ENST00000223215 GAPVD1Q14C86 1478 aa27.62■■■□□ 2.01
MEST-201ENST00000223215 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
MEST-201ENST00000223215 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
MEST-201ENST00000223215 CUL7Q14999 1698 aa27.54■■■□□ 2
MEST-201ENST00000223215 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
MEST-201ENST00000223215 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
MEST-201ENST00000223215 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms