RNA–Protein interactions for RNA: ENST00000412663.5

SPOCK2-203, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 5 BASIC

Gene SPOCK2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-203ENST00000412663 NISCHQ9Y2I1 1504 aa53.43■■■■■ 6.14
SPOCK2-203ENST00000412663 ABCC9O60706 1549 aa47.82■■■■■ 5.25
SPOCK2-203ENST00000412663 CCDC180Q9P1Z9 1646 aa47.8■■■■■ 5.24
SPOCK2-203ENST00000412663 RB1CC1Q8TDY2 1594 aa45.52■■■■■ 4.88
SPOCK2-203ENST00000412663 NACADO15069 1562 aa45.24■■■■■ 4.83
SPOCK2-203ENST00000412663 DCAF8L2P0C7V8 631 aa45.23■■■■■ 4.83
SPOCK2-203ENST00000412663 DNAJC5BQ9UF47 199 aa44.77■■■■■ 4.76
SPOCK2-203ENST00000412663 MYO15BQ96JP2 1530 aa44.64■■■■■ 4.74
SPOCK2-203ENST00000412663 PABPN1Q86U42 306 aaKnown RBP eCLIP44.61■■■■■ 4.73
SPOCK2-203ENST00000412663 UNC13AQ9UPW8 1703 aa44.36■■■■■ 4.69
SPOCK2-203ENST00000412663 ZCCHC6Q5VYS8 1495 aaKnown RBP44.29■■■■■ 4.68
SPOCK2-203ENST00000412663 BICRAQ9NZM4 1560 aa44.14■■■■■ 4.66
SPOCK2-203ENST00000412663 DCAF1Q9Y4B6 1507 aa44.11■■■■■ 4.65
SPOCK2-203ENST00000412663 SCRIBQ14160 1630 aa43.64■■■■■ 4.58
SPOCK2-203ENST00000412663 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
SPOCK2-203ENST00000412663 CC2D2AQ9P2K1 1620 aa43.14■■■■■ 4.5
SPOCK2-203ENST00000412663 EIF4G1Q04637 1599 aaKnown RBP43.08■■■■■ 4.49
SPOCK2-203ENST00000412663 CECR2Q9BXF3 1484 aa43.06■■■■■ 4.48
SPOCK2-203ENST00000412663 NCAPD3P42695 1498 aa41.79■■■■■ 4.28
SPOCK2-203ENST00000412663 ATAD2BQ9ULI0 1458 aa41.68■■■■■ 4.26
SPOCK2-203ENST00000412663 SMARCA4P51532 1647 aa41.62■■■■■ 4.25
SPOCK2-203ENST00000412663 SMARCA2P51531 1590 aa41.56■■■■■ 4.24
SPOCK2-203ENST00000412663 BAZ1AQ9NRL2 1556 aaPredicted RBP41.46■■■■■ 4.23
SPOCK2-203ENST00000412663 HMGXB3Q12766 1538 aa41.44■■■■■ 4.23
SPOCK2-203ENST00000412663 ERCC6Q03468 1493 aa41.3■■■■■ 4.2
SPOCK2-203ENST00000412663 BAZ1BQ9UIG0 1483 aaKnown RBP41.3■■■■■ 4.2
SPOCK2-203ENST00000412663 PEG3Q9GZU2 1588 aa41.2■■■■■ 4.19
SPOCK2-203ENST00000412663 MROH2BQ7Z745 1585 aa41.18■■■■■ 4.18
SPOCK2-203ENST00000412663 CUX2O14529 1486 aa41.13■■■■■ 4.17
SPOCK2-203ENST00000412663 NESP48681 1621 aa41.09■■■■■ 4.17
SPOCK2-203ENST00000412663 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
SPOCK2-203ENST00000412663 LAMC3Q9Y6N6 1575 aa40.79■■■■■ 4.12
SPOCK2-203ENST00000412663 WIZO95785 1651 aa40.66■■■■■ 4.1
SPOCK2-203ENST00000412663 PDS5BQ9NTI5 1447 aa40.63■■■■■ 4.09
SPOCK2-203ENST00000412663 CADPSQ9ULU8 1353 aa40.57■■■■■ 4.08
SPOCK2-203ENST00000412663 THOC2Q8NI27 1593 aaKnown RBP40.57■■■■■ 4.08
SPOCK2-203ENST00000412663 KIF21AQ7Z4S6 1674 aa40.47■■■■■ 4.07
SPOCK2-203ENST00000412663 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
SPOCK2-203ENST00000412663 MRC2Q9UBG0 1479 aa40.24■■■■■ 4.03
SPOCK2-203ENST00000412663 TOP2AP11388 1531 aaKnown RBP40.17■■■■■ 4.02
SPOCK2-203ENST00000412663 CEP164Q9UPV0 1460 aa40.12■■■■■ 4.01
SPOCK2-203ENST00000412663 CFTRP13569 1480 aa40.09■■■■■ 4.01
SPOCK2-203ENST00000412663 WDR62O43379 1518 aa40.09■■■■■ 4.01
SPOCK2-203ENST00000412663 FANCD2Q9BXW9 1451 aa40.08■■■■■ 4.01
SPOCK2-203ENST00000412663 CCDC88BA6NC98 1476 aa39.75■■■■□ 3.95
SPOCK2-203ENST00000412663 URB2Q14146 1524 aaKnown RBP39.72■■■■□ 3.95
SPOCK2-203ENST00000412663 PRDM2Q13029 1718 aa39.54■■■■□ 3.92
SPOCK2-203ENST00000412663 OSCARQ8IYS5 282 aa39.38■■■■□ 3.89
SPOCK2-203ENST00000412663 TRIM41Q8WV44 630 aa39.35■■■■□ 3.89
SPOCK2-203ENST00000412663 TOPBP1Q92547 1522 aa39.32■■■■□ 3.89
SPOCK2-203ENST00000412663 IFT140Q96RY7 1462 aa39.3■■■■□ 3.88
SPOCK2-203ENST00000412663 ABCC8Q09428 1581 aa39.26■■■■□ 3.88
SPOCK2-203ENST00000412663 ZNF608Q9ULD9 1512 aaPredicted RBP39.23■■■■□ 3.87
SPOCK2-203ENST00000412663 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
SPOCK2-203ENST00000412663 EIF4G3O43432 1585 aaKnown RBP38.95■■■■□ 3.83
SPOCK2-203ENST00000412663 POLA1P09884 1462 aaPredicted RBP38.92■■■■□ 3.82
SPOCK2-203ENST00000412663 AQRO60306 1485 aaKnown RBP eCLIP38.92■■■■□ 3.82
SPOCK2-203ENST00000412663 TARBP1Q13395 1621 aaKnown RBP38.91■■■■□ 3.82
SPOCK2-203ENST00000412663 SUPT5HO00267 1087 aaKnown RBP38.83■■■■□ 3.81
SPOCK2-203ENST00000412663 SOGA1O94964 1423 aa38.8■■■■□ 3.8
SPOCK2-203ENST00000412663 RAD54L2Q9Y4B4 1467 aa38.8■■■■□ 3.8
SPOCK2-203ENST00000412663 FBLN2P98095 1184 aa38.73■■■■□ 3.79
SPOCK2-203ENST00000412663 TDRD9Q8NDG6 1382 aaKnown RBP38.72■■■■□ 3.79
SPOCK2-203ENST00000412663 RIMBP3CA6NJZ7 1639 aa38.71■■■■□ 3.79
SPOCK2-203ENST00000412663 RIMBP3BA6NNM3 1639 aa38.71■■■■□ 3.79
SPOCK2-203ENST00000412663 RIMBP3Q9UFD9 1639 aa38.71■■■■□ 3.79
SPOCK2-203ENST00000412663 FGD5Q6ZNL6 1462 aa38.71■■■■□ 3.79
SPOCK2-203ENST00000412663 CUX1P39880 1505 aa38.68■■■■□ 3.78
SPOCK2-203ENST00000412663 ARHGEF11O15085 1522 aa38.64■■■■□ 3.78
SPOCK2-203ENST00000412663 CHD1O14646 1710 aa38.6■■■■□ 3.77
SPOCK2-203ENST00000412663 WDR97A6NE52 1622 aa38.51■■■■□ 3.76
SPOCK2-203ENST00000412663 SNAPC4Q5SXM2 1469 aa38.5■■■■□ 3.75
SPOCK2-203ENST00000412663 CYB5RLQ6IPT4 315 aa38.46■■■■□ 3.75
SPOCK2-203ENST00000412663 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
SPOCK2-203ENST00000412663 GRIN2BQ13224 1484 aa38.43■■■■□ 3.74
SPOCK2-203ENST00000412663 MAGI1Q96QZ7 1491 aaPredicted RBP38.4■■■■□ 3.74
SPOCK2-203ENST00000412663 GAPVD1Q14C86 1478 aa38.31■■■■□ 3.72
SPOCK2-203ENST00000412663 SYNJ2O15056 1496 aa38.28■■■■□ 3.72
SPOCK2-203ENST00000412663 ARAP1Q96P48 1450 aa38.28■■■■□ 3.72
SPOCK2-203ENST00000412663 ABCA10Q8WWZ4 1543 aa38.27■■■■□ 3.72
SPOCK2-203ENST00000412663 SYNJ1O43426 1573 aa38.23■■■■□ 3.71
SPOCK2-203ENST00000412663 CLASP1Q7Z460 1538 aa38.21■■■■□ 3.71
SPOCK2-203ENST00000412663 WRNQ14191 1432 aaPredicted RBP eCLIP38.2■■■■□ 3.71
SPOCK2-203ENST00000412663 PBRM1Q86U86 1689 aa38.17■■■■□ 3.7
SPOCK2-203ENST00000412663 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
SPOCK2-203ENST00000412663 TOP2BQ02880 1626 aa38.07■■■■□ 3.68
SPOCK2-203ENST00000412663 BIVM-ERCC5R4GMW8 1640 aa38.03■■■■□ 3.68
SPOCK2-203ENST00000412663 TRHP20396 242 aaPredicted RBP38.02■■■■□ 3.68
SPOCK2-203ENST00000412663 GRIN2AQ12879 1464 aa37.91■■■■□ 3.66
SPOCK2-203ENST00000412663 ADAMTS12P58397 1594 aa37.86■■■■□ 3.65
SPOCK2-203ENST00000412663 FHAD1B1AJZ9 1412 aa37.84■■■■□ 3.65
SPOCK2-203ENST00000412663 ERICH3Q5RHP9 1530 aa37.78■■■■□ 3.64
SPOCK2-203ENST00000412663 NUP160Q12769 1436 aa37.78■■■■□ 3.64
SPOCK2-203ENST00000412663 CEP170Q5SW79 1584 aa37.74■■■■□ 3.63
SPOCK2-203ENST00000412663 ERCC6L2Q5T890 1561 aa37.64■■■■□ 3.62
SPOCK2-203ENST00000412663 SHROOM2Q13796 1616 aa37.53■■■■□ 3.6
SPOCK2-203ENST00000412663 JPH4Q96JJ6 628 aa37.48■■■■□ 3.59
SPOCK2-203ENST00000412663 PRG4Q92954 1404 aaPredicted RBP37.45■■■■□ 3.59
SPOCK2-203ENST00000412663 KIF27Q86VH2 1401 aa37.42■■■■□ 3.58
SPOCK2-203ENST00000412663 IGF1RP08069 1367 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms