RNA–Protein interactions for RNA: ENST00000256722.9

CMPK2-201, Transcript of cytidine/uridine monophosphate kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CMPK2, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK2-201ENST00000256722 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
CMPK2-201ENST00000256722 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
CMPK2-201ENST00000256722 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
CMPK2-201ENST00000256722 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
CMPK2-201ENST00000256722 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
CMPK2-201ENST00000256722 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
CMPK2-201ENST00000256722 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
CMPK2-201ENST00000256722 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
CMPK2-201ENST00000256722 ABCC9O60706 1549 aa30.51■■■□□ 2.47
CMPK2-201ENST00000256722 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
CMPK2-201ENST00000256722 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
CMPK2-201ENST00000256722 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.39
CMPK2-201ENST00000256722 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
CMPK2-201ENST00000256722 CECR2Q9BXF3 1484 aa29.76■■■□□ 2.36
CMPK2-201ENST00000256722 NACADO15069 1562 aa29.7■■■□□ 2.35
CMPK2-201ENST00000256722 EHMT2Q96KQ7 1210 aa29.7■■■□□ 2.35
CMPK2-201ENST00000256722 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
CMPK2-201ENST00000256722 PCGF6Q9BYE7 350 aa29.64■■■□□ 2.34
CMPK2-201ENST00000256722 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
CMPK2-201ENST00000256722 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
CMPK2-201ENST00000256722 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.32
CMPK2-201ENST00000256722 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
CMPK2-201ENST00000256722 WIZO95785 1651 aa29.33■■■□□ 2.29
CMPK2-201ENST00000256722 HRCP23327 699 aa29.32■■■□□ 2.28
CMPK2-201ENST00000256722 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
CMPK2-201ENST00000256722 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CMPK2-201ENST00000256722 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
CMPK2-201ENST00000256722 TRIM26Q12899 539 aaPredicted RBP28.82■■■□□ 2.2
CMPK2-201ENST00000256722 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
CMPK2-201ENST00000256722 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
CMPK2-201ENST00000256722 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
CMPK2-201ENST00000256722 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
CMPK2-201ENST00000256722 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
CMPK2-201ENST00000256722 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
CMPK2-201ENST00000256722 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
CMPK2-201ENST00000256722 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
CMPK2-201ENST00000256722 SOGA1O94964 1423 aa28.43■■■□□ 2.14
CMPK2-201ENST00000256722 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
CMPK2-201ENST00000256722 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
CMPK2-201ENST00000256722 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
CMPK2-201ENST00000256722 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
CMPK2-201ENST00000256722 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
CMPK2-201ENST00000256722 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
CMPK2-201ENST00000256722 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
CMPK2-201ENST00000256722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.07■■■□□ 2.08
CMPK2-201ENST00000256722 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
CMPK2-201ENST00000256722 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
CMPK2-201ENST00000256722 SYNJ1O43426 1573 aa27.96■■■□□ 2.07
CMPK2-201ENST00000256722 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
CMPK2-201ENST00000256722 CCER1Q8TC90 406 aaPredicted RBP27.86■■■□□ 2.05
CMPK2-201ENST00000256722 ZEB1P37275 1124 aaPredicted RBP27.85■■■□□ 2.05
CMPK2-201ENST00000256722 PELP1Q8IZL8 1130 aaKnown RBP27.8■■■□□ 2.04
CMPK2-201ENST00000256722 EEA1Q15075 1411 aa27.78■■■□□ 2.04
CMPK2-201ENST00000256722 GOLGA3Q08378 1498 aa27.78■■■□□ 2.04
CMPK2-201ENST00000256722 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
CMPK2-201ENST00000256722 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
CMPK2-201ENST00000256722 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
CMPK2-201ENST00000256722 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
CMPK2-201ENST00000256722 CLIP1P30622 1438 aa27.6■■■□□ 2.01
CMPK2-201ENST00000256722 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
CMPK2-201ENST00000256722 APLP2Q06481 763 aa27.49■■□□□ 1.99
CMPK2-201ENST00000256722 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
CMPK2-201ENST00000256722 CUX1P39880 1505 aa27.44■■□□□ 1.98
CMPK2-201ENST00000256722 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
CMPK2-201ENST00000256722 KIF21BO75037 1637 aa27.42■■□□□ 1.98
CMPK2-201ENST00000256722 CFTRP13569 1480 aa27.36■■□□□ 1.97
CMPK2-201ENST00000256722 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
CMPK2-201ENST00000256722 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
CMPK2-201ENST00000256722 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
CMPK2-201ENST00000256722 KANK4Q5T7N3 995 aaPredicted RBP27.24■■□□□ 1.95
CMPK2-201ENST00000256722 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
CMPK2-201ENST00000256722 PRXQ9BXM0 1461 aa27.21■■□□□ 1.95
CMPK2-201ENST00000256722 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.94
CMPK2-201ENST00000256722 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
CMPK2-201ENST00000256722 CUX2O14529 1486 aa27.18■■□□□ 1.94
CMPK2-201ENST00000256722 P3H3Q8IVL6 736 aa27.15■■□□□ 1.94
CMPK2-201ENST00000256722 ITGAEP38570 1179 aa27.12■■□□□ 1.93
CMPK2-201ENST00000256722 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
CMPK2-201ENST00000256722 NESP48681 1621 aa27.09■■□□□ 1.93
CMPK2-201ENST00000256722 ATP1B4Q9UN42 357 aaPredicted RBP27.08■■□□□ 1.93
CMPK2-201ENST00000256722 IGF1RP08069 1367 aa27.07■■□□□ 1.92
CMPK2-201ENST00000256722 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
CMPK2-201ENST00000256722 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
CMPK2-201ENST00000256722 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.92
CMPK2-201ENST00000256722 ACIN1Q9UKV3 1341 aaKnown RBP27■■□□□ 1.91
CMPK2-201ENST00000256722 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
CMPK2-201ENST00000256722 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
CMPK2-201ENST00000256722 RAD54L2Q9Y4B4 1467 aa26.97■■□□□ 1.91
CMPK2-201ENST00000256722 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
CMPK2-201ENST00000256722 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
CMPK2-201ENST00000256722 ZNF316A6NFI3 1004 aaPredicted RBP26.84■■□□□ 1.89
CMPK2-201ENST00000256722 GTF3C3Q9Y5Q9 886 aa26.78■■□□□ 1.88
CMPK2-201ENST00000256722 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
CMPK2-201ENST00000256722 CENPBP07199 599 aaPredicted RBP26.77■■□□□ 1.88
CMPK2-201ENST00000256722 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
CMPK2-201ENST00000256722 YTHDC1Q96MU7 727 aaKnown RBP26.74■■□□□ 1.87
CMPK2-201ENST00000256722 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
CMPK2-201ENST00000256722 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
CMPK2-201ENST00000256722 FAM50AQ14320 339 aaKnown RBP26.7■■□□□ 1.87
CMPK2-201ENST00000256722 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms