RNA–Protein interactions for RNA: ENST00000272233.5

RHOB-201, Transcript of ras homolog family member B, humanhuman

APPRIS P1 BASIC

Gene RHOB, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOB-201ENST00000272233 NISCHQ9Y2I1 1504 aa40.44■■■■■ 4.07
RHOB-201ENST00000272233 CCDC180Q9P1Z9 1646 aa34.96■■■■□ 3.19
RHOB-201ENST00000272233 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.03
RHOB-201ENST00000272233 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
RHOB-201ENST00000272233 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
RHOB-201ENST00000272233 ABCC9O60706 1549 aa33.27■■■□□ 2.92
RHOB-201ENST00000272233 DCAF1Q9Y4B6 1507 aa33.22■■■□□ 2.91
RHOB-201ENST00000272233 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
RHOB-201ENST00000272233 NACADO15069 1562 aa32.55■■■□□ 2.8
RHOB-201ENST00000272233 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
RHOB-201ENST00000272233 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
RHOB-201ENST00000272233 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
RHOB-201ENST00000272233 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
RHOB-201ENST00000272233 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
RHOB-201ENST00000272233 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
RHOB-201ENST00000272233 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
RHOB-201ENST00000272233 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
RHOB-201ENST00000272233 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.62
RHOB-201ENST00000272233 WIZO95785 1651 aa31.16■■■□□ 2.58
RHOB-201ENST00000272233 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
RHOB-201ENST00000272233 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
RHOB-201ENST00000272233 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.54
RHOB-201ENST00000272233 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
RHOB-201ENST00000272233 PEG3Q9GZU2 1588 aa30.53■■■□□ 2.48
RHOB-201ENST00000272233 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
RHOB-201ENST00000272233 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
RHOB-201ENST00000272233 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
RHOB-201ENST00000272233 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
RHOB-201ENST00000272233 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
RHOB-201ENST00000272233 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
RHOB-201ENST00000272233 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
RHOB-201ENST00000272233 ABCC8Q09428 1581 aa30.04■■■□□ 2.4
RHOB-201ENST00000272233 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
RHOB-201ENST00000272233 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
RHOB-201ENST00000272233 LOC105371045A0A1W2PR82 267 aa29.97■■■□□ 2.39
RHOB-201ENST00000272233 FAM9AQ8IZU1 332 aaPredicted RBP29.91■■■□□ 2.38
RHOB-201ENST00000272233 EHMT2Q96KQ7 1210 aa29.67■■■□□ 2.34
RHOB-201ENST00000272233 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
RHOB-201ENST00000272233 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
RHOB-201ENST00000272233 HRCP23327 699 aa29.59■■■□□ 2.33
RHOB-201ENST00000272233 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
RHOB-201ENST00000272233 CFTRP13569 1480 aa29.56■■■□□ 2.32
RHOB-201ENST00000272233 SOGA1O94964 1423 aa29.52■■■□□ 2.32
RHOB-201ENST00000272233 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
RHOB-201ENST00000272233 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
RHOB-201ENST00000272233 NESP48681 1621 aa29.32■■■□□ 2.28
RHOB-201ENST00000272233 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
RHOB-201ENST00000272233 CUX1P39880 1505 aa29.3■■■□□ 2.28
RHOB-201ENST00000272233 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
RHOB-201ENST00000272233 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
RHOB-201ENST00000272233 CSRNP3Q8WYN3 585 aa29.19■■■□□ 2.26
RHOB-201ENST00000272233 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
RHOB-201ENST00000272233 EEA1Q15075 1411 aa29.12■■■□□ 2.25
RHOB-201ENST00000272233 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.24
RHOB-201ENST00000272233 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
RHOB-201ENST00000272233 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
RHOB-201ENST00000272233 UBTFP17480 764 aaKnown RBP28.92■■■□□ 2.22
RHOB-201ENST00000272233 GOLGA3Q08378 1498 aa28.89■■■□□ 2.21
RHOB-201ENST00000272233 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
RHOB-201ENST00000272233 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
RHOB-201ENST00000272233 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
RHOB-201ENST00000272233 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
RHOB-201ENST00000272233 KIF21BO75037 1637 aa28.84■■■□□ 2.21
RHOB-201ENST00000272233 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
RHOB-201ENST00000272233 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
RHOB-201ENST00000272233 URB2Q14146 1524 aaKnown RBP28.82■■■□□ 2.2
RHOB-201ENST00000272233 CEP162Q5TB80 1403 aa28.81■■■□□ 2.2
RHOB-201ENST00000272233 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
RHOB-201ENST00000272233 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
RHOB-201ENST00000272233 CUX2O14529 1486 aa28.8■■■□□ 2.2
RHOB-201ENST00000272233 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
RHOB-201ENST00000272233 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
RHOB-201ENST00000272233 PRXQ9BXM0 1461 aa28.71■■■□□ 2.19
RHOB-201ENST00000272233 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
RHOB-201ENST00000272233 RANGAP1P46060 587 aaPredicted RBP28.65■■■□□ 2.18
RHOB-201ENST00000272233 IGF1RP08069 1367 aa28.64■■■□□ 2.18
RHOB-201ENST00000272233 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
RHOB-201ENST00000272233 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
RHOB-201ENST00000272233 CLIP1P30622 1438 aa28.51■■■□□ 2.15
RHOB-201ENST00000272233 TDRD9Q8NDG6 1382 aaKnown RBP28.48■■■□□ 2.15
RHOB-201ENST00000272233 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
RHOB-201ENST00000272233 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
RHOB-201ENST00000272233 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
RHOB-201ENST00000272233 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
RHOB-201ENST00000272233 TTBK1Q5TCY1 1321 aaPredicted RBP28.4■■■□□ 2.14
RHOB-201ENST00000272233 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
RHOB-201ENST00000272233 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
RHOB-201ENST00000272233 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
RHOB-201ENST00000272233 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
RHOB-201ENST00000272233 WDR62O43379 1518 aa28.3■■■□□ 2.12
RHOB-201ENST00000272233 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
RHOB-201ENST00000272233 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
RHOB-201ENST00000272233 VPS8Q8N3P4 1428 aa28.24■■■□□ 2.11
RHOB-201ENST00000272233 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
RHOB-201ENST00000272233 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
RHOB-201ENST00000272233 CUL7Q14999 1698 aa28.21■■■□□ 2.11
RHOB-201ENST00000272233 PELP1Q8IZL8 1130 aaKnown RBP28.2■■■□□ 2.1
RHOB-201ENST00000272233 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
RHOB-201ENST00000272233 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
RHOB-201ENST00000272233 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms