RNA–Protein interactions for RNA: ENST00000357203.7

C3orf18-201, Transcript of chromosome 3 open reading frame 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf18, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf18-201ENST00000357203 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
C3orf18-201ENST00000357203 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
C3orf18-201ENST00000357203 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
C3orf18-201ENST00000357203 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
C3orf18-201ENST00000357203 ZCCHC6Q5VYS8 1495 aaKnown RBP31.37■■■□□ 2.61
C3orf18-201ENST00000357203 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
C3orf18-201ENST00000357203 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
C3orf18-201ENST00000357203 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
C3orf18-201ENST00000357203 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
C3orf18-201ENST00000357203 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
C3orf18-201ENST00000357203 LOC105371045A0A1W2PR82 267 aa29.7■■■□□ 2.35
C3orf18-201ENST00000357203 ABCC9O60706 1549 aa29.6■■■□□ 2.33
C3orf18-201ENST00000357203 PCGF6Q9BYE7 350 aa29.56■■■□□ 2.32
C3orf18-201ENST00000357203 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
C3orf18-201ENST00000357203 HRCP23327 699 aa29.32■■■□□ 2.28
C3orf18-201ENST00000357203 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.26
C3orf18-201ENST00000357203 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
C3orf18-201ENST00000357203 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
C3orf18-201ENST00000357203 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
C3orf18-201ENST00000357203 EHMT2Q96KQ7 1210 aa29.14■■■□□ 2.26
C3orf18-201ENST00000357203 NACADO15069 1562 aa29.1■■■□□ 2.25
C3orf18-201ENST00000357203 PPARGC1BQ86YN6 1023 aaKnown RBP29.04■■■□□ 2.24
C3orf18-201ENST00000357203 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
C3orf18-201ENST00000357203 WIZO95785 1651 aa28.83■■■□□ 2.21
C3orf18-201ENST00000357203 TRIM26Q12899 539 aaPredicted RBP28.78■■■□□ 2.2
C3orf18-201ENST00000357203 PABPN1Q86U42 306 aaKnown RBP eCLIP28.48■■■□□ 2.15
C3orf18-201ENST00000357203 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
C3orf18-201ENST00000357203 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
C3orf18-201ENST00000357203 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
C3orf18-201ENST00000357203 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
C3orf18-201ENST00000357203 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
C3orf18-201ENST00000357203 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
C3orf18-201ENST00000357203 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
C3orf18-201ENST00000357203 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
C3orf18-201ENST00000357203 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
C3orf18-201ENST00000357203 SOGA1O94964 1423 aa28.04■■■□□ 2.08
C3orf18-201ENST00000357203 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
C3orf18-201ENST00000357203 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
C3orf18-201ENST00000357203 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
C3orf18-201ENST00000357203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
C3orf18-201ENST00000357203 UBTFP17480 764 aaKnown RBP27.86■■■□□ 2.05
C3orf18-201ENST00000357203 CSRNP3Q8WYN3 585 aa27.83■■■□□ 2.05
C3orf18-201ENST00000357203 CEP162Q5TB80 1403 aa27.79■■■□□ 2.04
C3orf18-201ENST00000357203 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
C3orf18-201ENST00000357203 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
C3orf18-201ENST00000357203 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
C3orf18-201ENST00000357203 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
C3orf18-201ENST00000357203 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
C3orf18-201ENST00000357203 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
C3orf18-201ENST00000357203 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
C3orf18-201ENST00000357203 SYNJ1O43426 1573 aa27.55■■■□□ 2
C3orf18-201ENST00000357203 EEA1Q15075 1411 aa27.54■■■□□ 2
C3orf18-201ENST00000357203 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
C3orf18-201ENST00000357203 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
C3orf18-201ENST00000357203 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
C3orf18-201ENST00000357203 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
C3orf18-201ENST00000357203 CLIP1P30622 1438 aa27.29■■□□□ 1.96
C3orf18-201ENST00000357203 KIF21BO75037 1637 aa27.18■■□□□ 1.94
C3orf18-201ENST00000357203 APLP2Q06481 763 aa27.12■■□□□ 1.93
C3orf18-201ENST00000357203 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
C3orf18-201ENST00000357203 DIEXFQ68CQ4 756 aaKnown RBP27.09■■□□□ 1.93
C3orf18-201ENST00000357203 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
C3orf18-201ENST00000357203 VPS8Q8N3P4 1428 aa27.08■■□□□ 1.93
C3orf18-201ENST00000357203 NCAPD3P42695 1498 aa27.03■■□□□ 1.92
C3orf18-201ENST00000357203 CUX1P39880 1505 aa26.97■■□□□ 1.91
C3orf18-201ENST00000357203 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
C3orf18-201ENST00000357203 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
C3orf18-201ENST00000357203 PRXQ9BXM0 1461 aa26.89■■□□□ 1.89
C3orf18-201ENST00000357203 KANK4Q5T7N3 995 aaPredicted RBP26.89■■□□□ 1.89
C3orf18-201ENST00000357203 NEUROD1Q13562 356 aa26.86■■□□□ 1.89
C3orf18-201ENST00000357203 CFTRP13569 1480 aa26.84■■□□□ 1.89
C3orf18-201ENST00000357203 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
C3orf18-201ENST00000357203 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
C3orf18-201ENST00000357203 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
C3orf18-201ENST00000357203 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
C3orf18-201ENST00000357203 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
C3orf18-201ENST00000357203 ITGAEP38570 1179 aa26.68■■□□□ 1.86
C3orf18-201ENST00000357203 YTHDC1Q96MU7 727 aaKnown RBP26.67■■□□□ 1.86
C3orf18-201ENST00000357203 CUX2O14529 1486 aa26.67■■□□□ 1.86
C3orf18-201ENST00000357203 CADPSQ9ULU8 1353 aa26.62■■□□□ 1.85
C3orf18-201ENST00000357203 IGF1RP08069 1367 aa26.61■■□□□ 1.85
C3orf18-201ENST00000357203 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
C3orf18-201ENST00000357203 MIER1Q8N108 512 aa26.59■■□□□ 1.85
C3orf18-201ENST00000357203 GTF3C3Q9Y5Q9 886 aa26.57■■□□□ 1.84
C3orf18-201ENST00000357203 P3H3Q8IVL6 736 aa26.56■■□□□ 1.84
C3orf18-201ENST00000357203 CENPBP07199 599 aaPredicted RBP26.55■■□□□ 1.84
C3orf18-201ENST00000357203 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
C3orf18-201ENST00000357203 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
C3orf18-201ENST00000357203 DHX57Q6P158 1386 aaKnown RBP26.5■■□□□ 1.83
C3orf18-201ENST00000357203 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
C3orf18-201ENST00000357203 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
C3orf18-201ENST00000357203 CCNB3Q8WWL7 1395 aa26.41■■□□□ 1.82
C3orf18-201ENST00000357203 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.82
C3orf18-201ENST00000357203 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
C3orf18-201ENST00000357203 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
C3orf18-201ENST00000357203 NESP48681 1621 aa26.37■■□□□ 1.81
C3orf18-201ENST00000357203 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
C3orf18-201ENST00000357203 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
C3orf18-201ENST00000357203 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
C3orf18-201ENST00000357203 CLSPNQ9HAW4 1339 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms