RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
TNFAIP1-202ENST00000544907 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
TNFAIP1-202ENST00000544907 ABCC9O60706 1549 aa33.08■■■□□ 2.89
TNFAIP1-202ENST00000544907 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
TNFAIP1-202ENST00000544907 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
TNFAIP1-202ENST00000544907 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
TNFAIP1-202ENST00000544907 NACADO15069 1562 aa32.09■■■□□ 2.73
TNFAIP1-202ENST00000544907 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
TNFAIP1-202ENST00000544907 RB1CC1Q8TDY2 1594 aa32.04■■■□□ 2.72
TNFAIP1-202ENST00000544907 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
TNFAIP1-202ENST00000544907 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
TNFAIP1-202ENST00000544907 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
TNFAIP1-202ENST00000544907 SCRIBQ14160 1630 aa31.32■■■□□ 2.6
TNFAIP1-202ENST00000544907 BICRAQ9NZM4 1560 aa31.02■■■□□ 2.56
TNFAIP1-202ENST00000544907 PABPN1Q86U42 306 aaKnown RBP eCLIP30.94■■■□□ 2.54
TNFAIP1-202ENST00000544907 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
TNFAIP1-202ENST00000544907 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
TNFAIP1-202ENST00000544907 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
TNFAIP1-202ENST00000544907 CECR2Q9BXF3 1484 aa30.1■■■□□ 2.41
TNFAIP1-202ENST00000544907 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
TNFAIP1-202ENST00000544907 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
TNFAIP1-202ENST00000544907 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
TNFAIP1-202ENST00000544907 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
TNFAIP1-202ENST00000544907 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
TNFAIP1-202ENST00000544907 WIZO95785 1651 aa29.75■■■□□ 2.35
TNFAIP1-202ENST00000544907 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
TNFAIP1-202ENST00000544907 ATAD2BQ9ULI0 1458 aa29.67■■■□□ 2.34
TNFAIP1-202ENST00000544907 PEG3Q9GZU2 1588 aa29.66■■■□□ 2.34
TNFAIP1-202ENST00000544907 NCAPD3P42695 1498 aa29.57■■■□□ 2.32
TNFAIP1-202ENST00000544907 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
TNFAIP1-202ENST00000544907 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
TNFAIP1-202ENST00000544907 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
TNFAIP1-202ENST00000544907 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
TNFAIP1-202ENST00000544907 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
TNFAIP1-202ENST00000544907 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
TNFAIP1-202ENST00000544907 PCGF6Q9BYE7 350 aa28.89■■■□□ 2.21
TNFAIP1-202ENST00000544907 HRCP23327 699 aa28.86■■■□□ 2.21
TNFAIP1-202ENST00000544907 FAM9AQ8IZU1 332 aaPredicted RBP28.83■■■□□ 2.21
TNFAIP1-202ENST00000544907 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
TNFAIP1-202ENST00000544907 TRIM26Q12899 539 aaPredicted RBP28.8■■■□□ 2.2
TNFAIP1-202ENST00000544907 EEA1Q15075 1411 aa28.8■■■□□ 2.2
TNFAIP1-202ENST00000544907 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
TNFAIP1-202ENST00000544907 NESP48681 1621 aa28.75■■■□□ 2.19
TNFAIP1-202ENST00000544907 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
TNFAIP1-202ENST00000544907 CFTRP13569 1480 aa28.67■■■□□ 2.18
TNFAIP1-202ENST00000544907 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
TNFAIP1-202ENST00000544907 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
TNFAIP1-202ENST00000544907 PDS5BQ9NTI5 1447 aa28.54■■■□□ 2.16
TNFAIP1-202ENST00000544907 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
TNFAIP1-202ENST00000544907 SOGA1O94964 1423 aa28.5■■■□□ 2.15
TNFAIP1-202ENST00000544907 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
TNFAIP1-202ENST00000544907 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.15
TNFAIP1-202ENST00000544907 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
TNFAIP1-202ENST00000544907 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
TNFAIP1-202ENST00000544907 SYNJ1O43426 1573 aa28.44■■■□□ 2.14
TNFAIP1-202ENST00000544907 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
TNFAIP1-202ENST00000544907 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
TNFAIP1-202ENST00000544907 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
TNFAIP1-202ENST00000544907 RUSC2Q8N2Y8 1516 aa28.3■■■□□ 2.12
TNFAIP1-202ENST00000544907 CEP162Q5TB80 1403 aa28.29■■■□□ 2.12
TNFAIP1-202ENST00000544907 KIF21BO75037 1637 aa28.29■■■□□ 2.12
TNFAIP1-202ENST00000544907 BIVM-ERCC5R4GMW8 1640 aa28.27■■■□□ 2.12
TNFAIP1-202ENST00000544907 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
TNFAIP1-202ENST00000544907 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
TNFAIP1-202ENST00000544907 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
TNFAIP1-202ENST00000544907 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
TNFAIP1-202ENST00000544907 WDR62O43379 1518 aa28.13■■■□□ 2.09
TNFAIP1-202ENST00000544907 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
TNFAIP1-202ENST00000544907 UBTFP17480 764 aaKnown RBP28.07■■■□□ 2.08
TNFAIP1-202ENST00000544907 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
TNFAIP1-202ENST00000544907 TOPBP1Q92547 1522 aa28.03■■■□□ 2.08
TNFAIP1-202ENST00000544907 CUX2O14529 1486 aa28.02■■■□□ 2.08
TNFAIP1-202ENST00000544907 CUX1P39880 1505 aa28■■■□□ 2.07
TNFAIP1-202ENST00000544907 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
TNFAIP1-202ENST00000544907 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
TNFAIP1-202ENST00000544907 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
TNFAIP1-202ENST00000544907 CLIP1P30622 1438 aa27.89■■■□□ 2.06
TNFAIP1-202ENST00000544907 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
TNFAIP1-202ENST00000544907 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
TNFAIP1-202ENST00000544907 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.05
TNFAIP1-202ENST00000544907 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
TNFAIP1-202ENST00000544907 VPS8Q8N3P4 1428 aa27.81■■■□□ 2.04
TNFAIP1-202ENST00000544907 IFT140Q96RY7 1462 aa27.75■■■□□ 2.03
TNFAIP1-202ENST00000544907 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
TNFAIP1-202ENST00000544907 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
TNFAIP1-202ENST00000544907 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
TNFAIP1-202ENST00000544907 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
TNFAIP1-202ENST00000544907 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
TNFAIP1-202ENST00000544907 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
TNFAIP1-202ENST00000544907 IGF1RP08069 1367 aa27.53■■■□□ 2
TNFAIP1-202ENST00000544907 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
TNFAIP1-202ENST00000544907 APLP2Q06481 763 aa27.49■■□□□ 1.99
TNFAIP1-202ENST00000544907 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
TNFAIP1-202ENST00000544907 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.991e-11■■■■□ 24.7
TNFAIP1-202ENST00000544907 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
TNFAIP1-202ENST00000544907 CCER1Q8TC90 406 aaPredicted RBP27.44■■□□□ 1.98
TNFAIP1-202ENST00000544907 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
TNFAIP1-202ENST00000544907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.97
TNFAIP1-202ENST00000544907 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.97
TNFAIP1-202ENST00000544907 PBRM1Q86U86 1689 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms