RNA–Protein interactions for RNA: ENST00000379186.8

UBAP1-203, Transcript of ubiquitin associated protein 1, humanhuman

TSL 5 BASIC

Gene UBAP1, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-203ENST00000379186 NISCHQ9Y2I1 1504 aa36.65■■■■□ 3.46
UBAP1-203ENST00000379186 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
UBAP1-203ENST00000379186 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
UBAP1-203ENST00000379186 ZCCHC6Q5VYS8 1495 aaKnown RBP31■■■□□ 2.55
UBAP1-203ENST00000379186 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
UBAP1-203ENST00000379186 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
UBAP1-203ENST00000379186 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
UBAP1-203ENST00000379186 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
UBAP1-203ENST00000379186 DCAF1Q9Y4B6 1507 aa29.85■■■□□ 2.37
UBAP1-203ENST00000379186 PCGF6Q9BYE7 350 aa29.56■■■□□ 2.32
UBAP1-203ENST00000379186 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
UBAP1-203ENST00000379186 HRCP23327 699 aa29.49■■■□□ 2.31
UBAP1-203ENST00000379186 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
UBAP1-203ENST00000379186 ABCC9O60706 1549 aa29.26■■■□□ 2.27
UBAP1-203ENST00000379186 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
UBAP1-203ENST00000379186 PPARGC1BQ86YN6 1023 aaKnown RBP29.16■■■□□ 2.26
UBAP1-203ENST00000379186 RB1CC1Q8TDY2 1594 aa28.9■■■□□ 2.22
UBAP1-203ENST00000379186 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
UBAP1-203ENST00000379186 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
UBAP1-203ENST00000379186 EHMT2Q96KQ7 1210 aa28.81■■■□□ 2.2
UBAP1-203ENST00000379186 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
UBAP1-203ENST00000379186 TRIM26Q12899 539 aaPredicted RBP28.75■■■□□ 2.19
UBAP1-203ENST00000379186 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
UBAP1-203ENST00000379186 NACADO15069 1562 aa28.58■■■□□ 2.17
UBAP1-203ENST00000379186 WIZO95785 1651 aa28.47■■■□□ 2.15
UBAP1-203ENST00000379186 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
UBAP1-203ENST00000379186 EIF4G1Q04637 1599 aaKnown RBP28.01■■■□□ 2.07
UBAP1-203ENST00000379186 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
UBAP1-203ENST00000379186 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
UBAP1-203ENST00000379186 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
UBAP1-203ENST00000379186 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
UBAP1-203ENST00000379186 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
UBAP1-203ENST00000379186 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
UBAP1-203ENST00000379186 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.05
UBAP1-203ENST00000379186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
UBAP1-203ENST00000379186 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
UBAP1-203ENST00000379186 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
UBAP1-203ENST00000379186 SOGA1O94964 1423 aa27.76■■■□□ 2.03
UBAP1-203ENST00000379186 RUSC2Q8N2Y8 1516 aa27.66■■■□□ 2.02
UBAP1-203ENST00000379186 CCER1Q8TC90 406 aaPredicted RBP27.63■■■□□ 2.01
UBAP1-203ENST00000379186 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
UBAP1-203ENST00000379186 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
UBAP1-203ENST00000379186 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
UBAP1-203ENST00000379186 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
UBAP1-203ENST00000379186 TNIKQ9UKE5 1360 aa27.44■■□□□ 1.98
UBAP1-203ENST00000379186 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
UBAP1-203ENST00000379186 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
UBAP1-203ENST00000379186 EEA1Q15075 1411 aa27.28■■□□□ 1.96
UBAP1-203ENST00000379186 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
UBAP1-203ENST00000379186 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
UBAP1-203ENST00000379186 RANGAP1P46060 587 aaPredicted RBP27.2■■□□□ 1.95
UBAP1-203ENST00000379186 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
UBAP1-203ENST00000379186 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
UBAP1-203ENST00000379186 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
UBAP1-203ENST00000379186 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
UBAP1-203ENST00000379186 HNRNPUL2Q1KMD3 747 aaKnown RBP27.1■■□□□ 1.93
UBAP1-203ENST00000379186 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
UBAP1-203ENST00000379186 NEUROD1Q13562 356 aa27.04■■□□□ 1.92
UBAP1-203ENST00000379186 CLIP1P30622 1438 aa27.04■■□□□ 1.92
UBAP1-203ENST00000379186 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
UBAP1-203ENST00000379186 KIF21BO75037 1637 aa26.96■■□□□ 1.91
UBAP1-203ENST00000379186 ACIN1Q9UKV3 1341 aaKnown RBP26.95■■□□□ 1.91
UBAP1-203ENST00000379186 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
UBAP1-203ENST00000379186 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
UBAP1-203ENST00000379186 APLP2Q06481 763 aa26.82■■□□□ 1.88
UBAP1-203ENST00000379186 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
UBAP1-203ENST00000379186 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
UBAP1-203ENST00000379186 YTHDC1Q96MU7 727 aaKnown RBP26.69■■□□□ 1.86
UBAP1-203ENST00000379186 CENPBP07199 599 aaPredicted RBP26.66■■□□□ 1.86
UBAP1-203ENST00000379186 KANK4Q5T7N3 995 aaPredicted RBP26.65■■□□□ 1.86
UBAP1-203ENST00000379186 MIER1Q8N108 512 aa26.62■■□□□ 1.85
UBAP1-203ENST00000379186 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
UBAP1-203ENST00000379186 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
UBAP1-203ENST00000379186 CUX1P39880 1505 aa26.6■■□□□ 1.85
UBAP1-203ENST00000379186 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
UBAP1-203ENST00000379186 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
UBAP1-203ENST00000379186 PELP1Q8IZL8 1130 aaKnown RBP26.5■■□□□ 1.83
UBAP1-203ENST00000379186 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
UBAP1-203ENST00000379186 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
UBAP1-203ENST00000379186 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
UBAP1-203ENST00000379186 CFTRP13569 1480 aa26.41■■□□□ 1.82
UBAP1-203ENST00000379186 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
UBAP1-203ENST00000379186 ITGAEP38570 1179 aa26.38■■□□□ 1.81
UBAP1-203ENST00000379186 ARHGAP35Q9NRY4 1499 aa26.34■■□□□ 1.81
UBAP1-203ENST00000379186 CUX2O14529 1486 aa26.26■■□□□ 1.79
UBAP1-203ENST00000379186 IGF1RP08069 1367 aa26.25■■□□□ 1.79
UBAP1-203ENST00000379186 RRBP1Q9P2E9 1410 aaKnown RBP26.24■■□□□ 1.79
UBAP1-203ENST00000379186 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
UBAP1-203ENST00000379186 CLSPNQ9HAW4 1339 aa26.17■■□□□ 1.78
UBAP1-203ENST00000379186 P3H3Q8IVL6 736 aa26.16■■□□□ 1.78
UBAP1-203ENST00000379186 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
UBAP1-203ENST00000379186 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
UBAP1-203ENST00000379186 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
UBAP1-203ENST00000379186 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
UBAP1-203ENST00000379186 RAB3GAP2Q9H2M9 1393 aa26.04■■□□□ 1.76
UBAP1-203ENST00000379186 PHLDB1Q86UU1 1377 aa26■■□□□ 1.75
UBAP1-203ENST00000379186 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
UBAP1-203ENST00000379186 FAM50AQ14320 339 aaKnown RBP25.98■■□□□ 1.75
UBAP1-203ENST00000379186 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
UBAP1-203ENST00000379186 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms