RNA–Protein interactions for RNA: ENST00000611820.4

KDM6A-213, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,924 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-213ENST00000611820 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
KDM6A-213ENST00000611820 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
KDM6A-213ENST00000611820 PELP1Q8IZL8 1130 aaKnown RBP27.82■■■□□ 2.04
KDM6A-213ENST00000611820 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
KDM6A-213ENST00000611820 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
KDM6A-213ENST00000611820 ERICH6Q7L0X2 663 aa26.93■■□□□ 1.9
KDM6A-213ENST00000611820 APLP2Q06481 763 aa26.84■■□□□ 1.89
KDM6A-213ENST00000611820 TTBK1Q5TCY1 1321 aaPredicted RBP26.69■■□□□ 1.86
KDM6A-213ENST00000611820 CCER1Q8TC90 406 aaPredicted RBP26.56■■□□□ 1.84
KDM6A-213ENST00000611820 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
KDM6A-213ENST00000611820 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
KDM6A-213ENST00000611820 FAM9AQ8IZU1 332 aaPredicted RBP26.46■■□□□ 1.83
KDM6A-213ENST00000611820 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
KDM6A-213ENST00000611820 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
KDM6A-213ENST00000611820 MYT1Q01538 1121 aa26.08■■□□□ 1.77
KDM6A-213ENST00000611820 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.76
KDM6A-213ENST00000611820 NEFLP07196 543 aa26.05■■□□□ 1.76
KDM6A-213ENST00000611820 NISCHQ9Y2I1 1504 aa25.95■■□□□ 1.74
KDM6A-213ENST00000611820 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
KDM6A-213ENST00000611820 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
KDM6A-213ENST00000611820 DAXXQ9UER7 740 aaPredicted RBP25.52■■□□□ 1.68
KDM6A-213ENST00000611820 UBTFP17480 764 aaKnown RBP25.51■■□□□ 1.67
KDM6A-213ENST00000611820 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
KDM6A-213ENST00000611820 POLR3GLQ9BT43 218 aa25.24■■□□□ 1.63
KDM6A-213ENST00000611820 CNGB1Q14028 1251 aaPredicted RBP25.08■■□□□ 1.61
KDM6A-213ENST00000611820 HRCP23327 699 aa25.07■■□□□ 1.6
KDM6A-213ENST00000611820 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
KDM6A-213ENST00000611820 ITGAEP38570 1179 aa25.03■■□□□ 1.6
KDM6A-213ENST00000611820 RTL5Q5HYW3 569 aaPredicted RBP24.98■■□□□ 1.59
KDM6A-213ENST00000611820 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
KDM6A-213ENST00000611820 MYT1LQ9UL68 1186 aa24.9■■□□□ 1.58
KDM6A-213ENST00000611820 CLSPNQ9HAW4 1339 aa24.8■■□□□ 1.56
KDM6A-213ENST00000611820 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
KDM6A-213ENST00000611820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
KDM6A-213ENST00000611820 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
KDM6A-213ENST00000611820 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
KDM6A-213ENST00000611820 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
KDM6A-213ENST00000611820 BCANQ96GW7 911 aa24.55■■□□□ 1.52
KDM6A-213ENST00000611820 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
KDM6A-213ENST00000611820 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
KDM6A-213ENST00000611820 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
KDM6A-213ENST00000611820 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
KDM6A-213ENST00000611820 FAM50AQ14320 339 aaKnown RBP24.2■■□□□ 1.46
KDM6A-213ENST00000611820 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
KDM6A-213ENST00000611820 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
KDM6A-213ENST00000611820 ZBTB47Q9UFB7 747 aaPredicted RBP24.16■■□□□ 1.46
KDM6A-213ENST00000611820 ANP32CO43423 234 aa24.08■■□□□ 1.45
KDM6A-213ENST00000611820 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
KDM6A-213ENST00000611820 CANXP27824 592 aaKnown RBP24.03■■□□□ 1.44
KDM6A-213ENST00000611820 EIF5BO60841 1220 aaKnown RBP23.97■■□□□ 1.43
KDM6A-213ENST00000611820 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
KDM6A-213ENST00000611820 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
KDM6A-213ENST00000611820 ANP32AP39687 249 aaKnown RBP23.93■■□□□ 1.42
KDM6A-213ENST00000611820 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
KDM6A-213ENST00000611820 ANP32BQ92688 251 aaKnown RBP23.71■■□□□ 1.39
KDM6A-213ENST00000611820 NEFMP07197 916 aa23.67■■□□□ 1.38
KDM6A-213ENST00000611820 HSP90AA1P07900 732 aaKnown RBP23.6■■□□□ 1.37
KDM6A-213ENST00000611820 FKBP8Q14318 412 aa23.59■■□□□ 1.37
KDM6A-213ENST00000611820 GLIPR1L2Q4G1C9 344 aa23.58■■□□□ 1.36
KDM6A-213ENST00000611820 NBR1Q14596 966 aa23.5■■□□□ 1.35
KDM6A-213ENST00000611820 ARXQ96QS3 562 aa23.49■■□□□ 1.35
KDM6A-213ENST00000611820 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
KDM6A-213ENST00000611820 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
KDM6A-213ENST00000611820 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
KDM6A-213ENST00000611820 FBLN2P98095 1184 aa23.32■■□□□ 1.32
KDM6A-213ENST00000611820 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
KDM6A-213ENST00000611820 SALL2Q9Y467 1007 aaPredicted RBP23.31■■□□□ 1.32
KDM6A-213ENST00000611820 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
KDM6A-213ENST00000611820 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
KDM6A-213ENST00000611820 CCDC136Q96JN2 1154 aa23.22■■□□□ 1.31
KDM6A-213ENST00000611820 DDX10Q13206 875 aaKnown RBP23.17■■□□□ 1.3
KDM6A-213ENST00000611820 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
KDM6A-213ENST00000611820 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
KDM6A-213ENST00000611820 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
KDM6A-213ENST00000611820 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
KDM6A-213ENST00000611820 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
KDM6A-213ENST00000611820 TMC1Q8TDI8 760 aa23.02■■□□□ 1.28
KDM6A-213ENST00000611820 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
KDM6A-213ENST00000611820 CDK11BP21127 795 aaKnown RBP22.98■■□□□ 1.27
KDM6A-213ENST00000611820 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
KDM6A-213ENST00000611820 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
KDM6A-213ENST00000611820 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
KDM6A-213ENST00000611820 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
KDM6A-213ENST00000611820 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
KDM6A-213ENST00000611820 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
KDM6A-213ENST00000611820 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
KDM6A-213ENST00000611820 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
KDM6A-213ENST00000611820 DDRGK1Q96HY6 314 aa22.85■■□□□ 1.25
KDM6A-213ENST00000611820 NCLP19338 710 aaKnown RBP22.85■■□□□ 1.25
KDM6A-213ENST00000611820 BECN1Q14457 450 aa22.83■■□□□ 1.25
KDM6A-213ENST00000611820 TNNT2P45379 298 aaPredicted RBP22.81■■□□□ 1.24
KDM6A-213ENST00000611820 MIER1Q8N108 512 aa22.8■■□□□ 1.24
KDM6A-213ENST00000611820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.24
KDM6A-213ENST00000611820 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
KDM6A-213ENST00000611820 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
KDM6A-213ENST00000611820 PTMAP06454 111 aaKnown RBP22.78■■□□□ 1.24
KDM6A-213ENST00000611820 HIRIP3Q9BW71 556 aaPredicted RBP22.77■■□□□ 1.24
KDM6A-213ENST00000611820 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
KDM6A-213ENST00000611820 GOLGA6L22H0YM25 854 aa22.75■■□□□ 1.23
KDM6A-213ENST00000611820 RTN4Q9NQC3 1192 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms