RNA–Protein interactions for RNA: ENST00000629232.1

PARP1-210, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 5 BASIC

Gene PARP1, Length 477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-210ENST00000629232 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
PARP1-210ENST00000629232 ABCC9O60706 1549 aa46.16■■■■■ 4.98
PARP1-210ENST00000629232 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
PARP1-210ENST00000629232 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
PARP1-210ENST00000629232 DNAJC5BQ9UF47 199 aa43.52■■■■■ 4.56
PARP1-210ENST00000629232 NACADO15069 1562 aa43.44■■■■■ 4.54
PARP1-210ENST00000629232 DCAF8L2P0C7V8 631 aa43.2■■■■■ 4.51
PARP1-210ENST00000629232 PABPN1Q86U42 306 aaKnown RBP eCLIP42.92■■■■■ 4.46
PARP1-210ENST00000629232 UNC13AQ9UPW8 1703 aa42.75■■■■■ 4.43
PARP1-210ENST00000629232 MYO15BQ96JP2 1530 aa42.72■■■■■ 4.43
PARP1-210ENST00000629232 ZCCHC6Q5VYS8 1495 aaKnown RBP42.53■■■■■ 4.4
PARP1-210ENST00000629232 BICRAQ9NZM4 1560 aa42.47■■■■■ 4.39
PARP1-210ENST00000629232 DCAF1Q9Y4B6 1507 aa42.38■■■■■ 4.37
PARP1-210ENST00000629232 SHROOM4Q9ULL8 1493 aa41.98■■■■■ 4.31
PARP1-210ENST00000629232 SCRIBQ14160 1630 aa41.74■■■■■ 4.27
PARP1-210ENST00000629232 CC2D2AQ9P2K1 1620 aa41.67■■■■■ 4.26
PARP1-210ENST00000629232 CECR2Q9BXF3 1484 aa41.64■■■■■ 4.26
PARP1-210ENST00000629232 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
PARP1-210ENST00000629232 DNAJC5Q9H3Z4 198 aa40.29■■■■■ 4.04
PARP1-210ENST00000629232 NCAPD3P42695 1498 aa40.08■■■■■ 4.01
PARP1-210ENST00000629232 CUX2O14529 1486 aa39.96■■■■□ 3.99
PARP1-210ENST00000629232 ERCC6Q03468 1493 aa39.95■■■■□ 3.99
PARP1-210ENST00000629232 ATAD2BQ9ULI0 1458 aa39.9■■■■□ 3.98
PARP1-210ENST00000629232 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
PARP1-210ENST00000629232 SMARCA4P51532 1647 aa39.78■■■■□ 3.96
PARP1-210ENST00000629232 HMGXB3Q12766 1538 aa39.76■■■■□ 3.96
PARP1-210ENST00000629232 BAZ1AQ9NRL2 1556 aaPredicted RBP39.67■■■■□ 3.94
PARP1-210ENST00000629232 BAZ1BQ9UIG0 1483 aaKnown RBP39.55■■■■□ 3.92
PARP1-210ENST00000629232 NESP48681 1621 aa39.52■■■■□ 3.92
PARP1-210ENST00000629232 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
PARP1-210ENST00000629232 MROH2BQ7Z745 1585 aa39.4■■■■□ 3.9
PARP1-210ENST00000629232 LAMC3Q9Y6N6 1575 aa39.26■■■■□ 3.88
PARP1-210ENST00000629232 THOC2Q8NI27 1593 aaKnown RBP39.2■■■■□ 3.87
PARP1-210ENST00000629232 PDS5BQ9NTI5 1447 aa39.08■■■■□ 3.85
PARP1-210ENST00000629232 KIF21AQ7Z4S6 1674 aa39.02■■■■□ 3.84
PARP1-210ENST00000629232 WIZO95785 1651 aa38.94■■■■□ 3.82
PARP1-210ENST00000629232 CADPSQ9ULU8 1353 aa38.87■■■■□ 3.81
PARP1-210ENST00000629232 RSF1Q96T23 1441 aaPredicted RBP38.87■■■■□ 3.81
PARP1-210ENST00000629232 MRC2Q9UBG0 1479 aa38.73■■■■□ 3.79
PARP1-210ENST00000629232 WDR62O43379 1518 aa38.62■■■■□ 3.77
PARP1-210ENST00000629232 CEP164Q9UPV0 1460 aa38.53■■■■□ 3.76
PARP1-210ENST00000629232 TOP2AP11388 1531 aaKnown RBP38.52■■■■□ 3.76
PARP1-210ENST00000629232 FANCD2Q9BXW9 1451 aa38.43■■■■□ 3.74
PARP1-210ENST00000629232 TRIM41Q8WV44 630 aa38.43■■■■□ 3.74
PARP1-210ENST00000629232 CFTRP13569 1480 aa38.34■■■■□ 3.73
PARP1-210ENST00000629232 CCDC88BA6NC98 1476 aa38.11■■■■□ 3.69
PARP1-210ENST00000629232 OSCARQ8IYS5 282 aa38.11■■■■□ 3.69
PARP1-210ENST00000629232 URB2Q14146 1524 aaKnown RBP38.09■■■■□ 3.69
PARP1-210ENST00000629232 PRDM2Q13029 1718 aa37.94■■■■□ 3.66
PARP1-210ENST00000629232 IFT140Q96RY7 1462 aa37.77■■■■□ 3.64
PARP1-210ENST00000629232 ZNF608Q9ULD9 1512 aaPredicted RBP37.67■■■■□ 3.62
PARP1-210ENST00000629232 TOPBP1Q92547 1522 aa37.65■■■■□ 3.62
PARP1-210ENST00000629232 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
PARP1-210ENST00000629232 RIMBP3CA6NJZ7 1639 aa37.58■■■■□ 3.61
PARP1-210ENST00000629232 RIMBP3BA6NNM3 1639 aa37.58■■■■□ 3.61
PARP1-210ENST00000629232 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
PARP1-210ENST00000629232 SUPT5HO00267 1087 aaKnown RBP37.58■■■■□ 3.61
PARP1-210ENST00000629232 DNMBPQ6XZF7 1577 aa37.5■■■■□ 3.59
PARP1-210ENST00000629232 EIF4G3O43432 1585 aaKnown RBP37.47■■■■□ 3.59
PARP1-210ENST00000629232 ARHGEF11O15085 1522 aa37.44■■■■□ 3.58
PARP1-210ENST00000629232 AQRO60306 1485 aaKnown RBP eCLIP37.32■■■■□ 3.562e-15■■■■□ 19.3
PARP1-210ENST00000629232 TARBP1Q13395 1621 aaKnown RBP37.31■■■■□ 3.56
PARP1-210ENST00000629232 CHD1O14646 1710 aa37.25■■■■□ 3.55
PARP1-210ENST00000629232 POLA1P09884 1462 aaPredicted RBP37.24■■■■□ 3.55
PARP1-210ENST00000629232 FBLN2P98095 1184 aa37.22■■■■□ 3.55
PARP1-210ENST00000629232 CYB5RLQ6IPT4 315 aa37.22■■■■□ 3.55
PARP1-210ENST00000629232 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
PARP1-210ENST00000629232 SOGA1O94964 1423 aa37.1■■■■□ 3.53
PARP1-210ENST00000629232 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
PARP1-210ENST00000629232 ARAP1Q96P48 1450 aa37.03■■■■□ 3.52
PARP1-210ENST00000629232 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
PARP1-210ENST00000629232 CUX1P39880 1505 aa36.97■■■■□ 3.51
PARP1-210ENST00000629232 TRHP20396 242 aaPredicted RBP36.97■■■■□ 3.51
PARP1-210ENST00000629232 FGD5Q6ZNL6 1462 aa36.96■■■■□ 3.51
PARP1-210ENST00000629232 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
PARP1-210ENST00000629232 CHMP7Q8WUX9 453 aaPredicted RBP36.9■■■■□ 3.5
PARP1-210ENST00000629232 MAGI1Q96QZ7 1491 aaPredicted RBP36.86■■■■□ 3.49
PARP1-210ENST00000629232 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
PARP1-210ENST00000629232 GRIN2BQ13224 1484 aa36.82■■■■□ 3.49
PARP1-210ENST00000629232 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
PARP1-210ENST00000629232 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
PARP1-210ENST00000629232 GAPVD1Q14C86 1478 aa36.64■■■■□ 3.46
PARP1-210ENST00000629232 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
PARP1-210ENST00000629232 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
PARP1-210ENST00000629232 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
PARP1-210ENST00000629232 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
PARP1-210ENST00000629232 BIVM-ERCC5R4GMW8 1640 aa36.56■■■■□ 3.44
PARP1-210ENST00000629232 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
PARP1-210ENST00000629232 GRIN2AQ12879 1464 aa36.32■■■■□ 3.41
PARP1-210ENST00000629232 ADAMTS12P58397 1594 aa36.25■■■■□ 3.39
PARP1-210ENST00000629232 NUP160Q12769 1436 aa36.2■■■■□ 3.39
PARP1-210ENST00000629232 AEBP2Q6ZN18 517 aaPredicted RBP36.18■■■■□ 3.38
PARP1-210ENST00000629232 CEP170Q5SW79 1584 aa36.18■■■■□ 3.38
PARP1-210ENST00000629232 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
PARP1-210ENST00000629232 ERCC6L2Q5T890 1561 aa36.17■■■■□ 3.38
PARP1-210ENST00000629232 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.37
PARP1-210ENST00000629232 SHROOM2Q13796 1616 aa36.06■■■■□ 3.36
PARP1-210ENST00000629232 KIF27Q86VH2 1401 aa35.91■■■■□ 3.34
PARP1-210ENST00000629232 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
PARP1-210ENST00000629232 JPH4Q96JJ6 628 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms