RNA–Protein interactions for RNA: ENST00000323274.14

TYMS-203, Transcript of thymidylate synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TYMS, Length 1,662 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-203ENST00000323274 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
TYMS-203ENST00000323274 CCDC180Q9P1Z9 1646 aa37.13■■■■□ 3.53
TYMS-203ENST00000323274 ZCCHC6Q5VYS8 1495 aaKnown RBP35.64■■■■□ 3.3
TYMS-203ENST00000323274 ABCC9O60706 1549 aa35.32■■■■□ 3.24
TYMS-203ENST00000323274 DCAF1Q9Y4B6 1507 aa35.12■■■■□ 3.21
TYMS-203ENST00000323274 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
TYMS-203ENST00000323274 MYO15BQ96JP2 1530 aa34.74■■■■□ 3.15
TYMS-203ENST00000323274 NACADO15069 1562 aa34.6■■■■□ 3.13
TYMS-203ENST00000323274 SHROOM4Q9ULL8 1493 aa34.5■■■■□ 3.11
TYMS-203ENST00000323274 RB1CC1Q8TDY2 1594 aa34.37■■■■□ 3.09
TYMS-203ENST00000323274 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
TYMS-203ENST00000323274 UNC13AQ9UPW8 1703 aa33.61■■■□□ 2.97
TYMS-203ENST00000323274 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
TYMS-203ENST00000323274 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
TYMS-203ENST00000323274 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
TYMS-203ENST00000323274 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
TYMS-203ENST00000323274 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
TYMS-203ENST00000323274 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
TYMS-203ENST00000323274 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
TYMS-203ENST00000323274 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
TYMS-203ENST00000323274 WIZO95785 1651 aa32.52■■■□□ 2.8
TYMS-203ENST00000323274 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
TYMS-203ENST00000323274 PEG3Q9GZU2 1588 aa32.26■■■□□ 2.76
TYMS-203ENST00000323274 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.75
TYMS-203ENST00000323274 SMARCA2P51531 1590 aa32.14■■■□□ 2.73
TYMS-203ENST00000323274 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
TYMS-203ENST00000323274 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
TYMS-203ENST00000323274 CC2D2AQ9P2K1 1620 aa31.95■■■□□ 2.71
TYMS-203ENST00000323274 BAZ1BQ9UIG0 1483 aaKnown RBP31.94■■■□□ 2.7
TYMS-203ENST00000323274 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
TYMS-203ENST00000323274 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
TYMS-203ENST00000323274 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
TYMS-203ENST00000323274 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
TYMS-203ENST00000323274 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
TYMS-203ENST00000323274 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
TYMS-203ENST00000323274 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
TYMS-203ENST00000323274 PRDM2Q13029 1718 aa31.11■■■□□ 2.57
TYMS-203ENST00000323274 CFTRP13569 1480 aa31.1■■■□□ 2.57
TYMS-203ENST00000323274 WRNQ14191 1432 aaPredicted RBP eCLIP30.97■■■□□ 2.55
TYMS-203ENST00000323274 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
TYMS-203ENST00000323274 NESP48681 1621 aa30.85■■■□□ 2.53
TYMS-203ENST00000323274 SYNJ1O43426 1573 aa30.85■■■□□ 2.53
TYMS-203ENST00000323274 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
TYMS-203ENST00000323274 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
TYMS-203ENST00000323274 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
TYMS-203ENST00000323274 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
TYMS-203ENST00000323274 CUX1P39880 1505 aa30.64■■■□□ 2.5
TYMS-203ENST00000323274 FAM9AQ8IZU1 332 aaPredicted RBP30.62■■■□□ 2.49
TYMS-203ENST00000323274 EEA1Q15075 1411 aa30.56■■■□□ 2.48
TYMS-203ENST00000323274 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
TYMS-203ENST00000323274 SOGA1O94964 1423 aa30.51■■■□□ 2.47
TYMS-203ENST00000323274 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
TYMS-203ENST00000323274 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
TYMS-203ENST00000323274 DNMBPQ6XZF7 1577 aa30.43■■■□□ 2.46
TYMS-203ENST00000323274 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
TYMS-203ENST00000323274 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
TYMS-203ENST00000323274 TOPBP1Q92547 1522 aa30.34■■■□□ 2.45
TYMS-203ENST00000323274 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
TYMS-203ENST00000323274 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
TYMS-203ENST00000323274 CSRNP3Q8WYN3 585 aa30.31■■■□□ 2.44
TYMS-203ENST00000323274 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
TYMS-203ENST00000323274 KIF27Q86VH2 1401 aa30.21■■■□□ 2.43
TYMS-203ENST00000323274 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
TYMS-203ENST00000323274 KIF21BO75037 1637 aa30.17■■■□□ 2.42
TYMS-203ENST00000323274 EHMT2Q96KQ7 1210 aa30.17■■■□□ 2.42
TYMS-203ENST00000323274 WDR62O43379 1518 aa30.14■■■□□ 2.42
TYMS-203ENST00000323274 CUX2O14529 1486 aa30.12■■■□□ 2.41
TYMS-203ENST00000323274 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
TYMS-203ENST00000323274 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
TYMS-203ENST00000323274 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
TYMS-203ENST00000323274 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
TYMS-203ENST00000323274 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
TYMS-203ENST00000323274 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
TYMS-203ENST00000323274 ERICH3Q5RHP9 1530 aa29.97■■■□□ 2.39
TYMS-203ENST00000323274 PRXQ9BXM0 1461 aa29.96■■■□□ 2.39
TYMS-203ENST00000323274 UBTFP17480 764 aaKnown RBP29.93■■■□□ 2.38
TYMS-203ENST00000323274 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
TYMS-203ENST00000323274 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
TYMS-203ENST00000323274 IFT140Q96RY7 1462 aa29.89■■■□□ 2.37
TYMS-203ENST00000323274 IGF1RP08069 1367 aa29.87■■■□□ 2.37
TYMS-203ENST00000323274 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
TYMS-203ENST00000323274 CEP162Q5TB80 1403 aa29.81■■■□□ 2.36
TYMS-203ENST00000323274 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
TYMS-203ENST00000323274 CUL7Q14999 1698 aa29.79■■■□□ 2.36
TYMS-203ENST00000323274 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
TYMS-203ENST00000323274 CARMIL1Q5VZK9 1371 aa29.76■■■□□ 2.35
TYMS-203ENST00000323274 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
TYMS-203ENST00000323274 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
TYMS-203ENST00000323274 AQRO60306 1485 aaKnown RBP eCLIP29.66■■■□□ 2.344e-7■■■■■ 33.1
TYMS-203ENST00000323274 CLIP1P30622 1438 aa29.61■■■□□ 2.33
TYMS-203ENST00000323274 GRIN2BQ13224 1484 aa29.56■■■□□ 2.32
TYMS-203ENST00000323274 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
TYMS-203ENST00000323274 CTTNBP2Q8WZ74 1663 aa29.48■■■□□ 2.31
TYMS-203ENST00000323274 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
TYMS-203ENST00000323274 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
TYMS-203ENST00000323274 RANGAP1P46060 587 aaPredicted RBP29.4■■■□□ 2.3
TYMS-203ENST00000323274 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
TYMS-203ENST00000323274 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
TYMS-203ENST00000323274 VPS8Q8N3P4 1428 aa29.34■■■□□ 2.29
TYMS-203ENST00000323274 ARAP1Q96P48 1450 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms