RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
KDSR-202ENST00000406396 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
KDSR-202ENST00000406396 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
KDSR-202ENST00000406396 SHROOM4Q9ULL8 1493 aa27.87■■■□□ 2.05
KDSR-202ENST00000406396 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
KDSR-202ENST00000406396 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
KDSR-202ENST00000406396 APLP2Q06481 763 aa27.03■■□□□ 1.92
KDSR-202ENST00000406396 PCGF6Q9BYE7 350 aa26.88■■□□□ 1.89
KDSR-202ENST00000406396 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
KDSR-202ENST00000406396 TTBK1Q5TCY1 1321 aaPredicted RBP26.71■■□□□ 1.87
KDSR-202ENST00000406396 CENPBP07199 599 aaPredicted RBP26.49■■□□□ 1.83
KDSR-202ENST00000406396 ZEB1P37275 1124 aaPredicted RBP26.44■■□□□ 1.82
KDSR-202ENST00000406396 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
KDSR-202ENST00000406396 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
KDSR-202ENST00000406396 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
KDSR-202ENST00000406396 ERICH6Q7L0X2 663 aa26.26■■□□□ 1.79
KDSR-202ENST00000406396 UBTFP17480 764 aaKnown RBP25.98■■□□□ 1.75
KDSR-202ENST00000406396 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
KDSR-202ENST00000406396 YTHDC1Q96MU7 727 aaKnown RBP25.91■■□□□ 1.74
KDSR-202ENST00000406396 NEFLP07196 543 aa25.86■■□□□ 1.73
KDSR-202ENST00000406396 ABCC9O60706 1549 aa25.79■■□□□ 1.72
KDSR-202ENST00000406396 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
KDSR-202ENST00000406396 MYT1Q01538 1121 aa25.7■■□□□ 1.7
KDSR-202ENST00000406396 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
KDSR-202ENST00000406396 HRCP23327 699 aa25.56■■□□□ 1.68
KDSR-202ENST00000406396 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
KDSR-202ENST00000406396 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
KDSR-202ENST00000406396 ITGAEP38570 1179 aa25.25■■□□□ 1.63
KDSR-202ENST00000406396 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
KDSR-202ENST00000406396 HNRNPUL2Q1KMD3 747 aaKnown RBP25.14■■□□□ 1.62
KDSR-202ENST00000406396 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
KDSR-202ENST00000406396 DAXXQ9UER7 740 aaPredicted RBP25.07■■□□□ 1.6
KDSR-202ENST00000406396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
KDSR-202ENST00000406396 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
KDSR-202ENST00000406396 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
KDSR-202ENST00000406396 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
KDSR-202ENST00000406396 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
KDSR-202ENST00000406396 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
KDSR-202ENST00000406396 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
KDSR-202ENST00000406396 RTL5Q5HYW3 569 aaPredicted RBP24.61■■□□□ 1.53
KDSR-202ENST00000406396 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
KDSR-202ENST00000406396 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
KDSR-202ENST00000406396 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
KDSR-202ENST00000406396 SLC4A1APQ9BWU0 796 aaKnown RBP24.5■■□□□ 1.51
KDSR-202ENST00000406396 GTF3C3Q9Y5Q9 886 aa24.48■■□□□ 1.51
KDSR-202ENST00000406396 NEUROD1Q13562 356 aa24.43■■□□□ 1.5
KDSR-202ENST00000406396 BCANQ96GW7 911 aa24.43■■□□□ 1.5
KDSR-202ENST00000406396 FBLN2P98095 1184 aa24.42■■□□□ 1.5
KDSR-202ENST00000406396 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
KDSR-202ENST00000406396 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
KDSR-202ENST00000406396 ANP32CO43423 234 aa24.3■■□□□ 1.48
KDSR-202ENST00000406396 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
KDSR-202ENST00000406396 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
KDSR-202ENST00000406396 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
KDSR-202ENST00000406396 NACADO15069 1562 aa24.15■■□□□ 1.46
KDSR-202ENST00000406396 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
KDSR-202ENST00000406396 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
KDSR-202ENST00000406396 ZBTB47Q9UFB7 747 aaPredicted RBP23.93■■□□□ 1.42
KDSR-202ENST00000406396 CANXP27824 592 aaKnown RBP23.88■■□□□ 1.41
KDSR-202ENST00000406396 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
KDSR-202ENST00000406396 ANP32AP39687 249 aaKnown RBP23.82■■□□□ 1.4
KDSR-202ENST00000406396 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
KDSR-202ENST00000406396 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
KDSR-202ENST00000406396 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
KDSR-202ENST00000406396 NPM1P06748 294 aaKnown RBP eCLIP23.72■■□□□ 1.39
KDSR-202ENST00000406396 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
KDSR-202ENST00000406396 FKBP8Q14318 412 aa23.71■■□□□ 1.39
KDSR-202ENST00000406396 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.39
KDSR-202ENST00000406396 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
KDSR-202ENST00000406396 NEFMP07197 916 aa23.68■■□□□ 1.38
KDSR-202ENST00000406396 SLC24A1O60721 1099 aa23.64■■□□□ 1.38
KDSR-202ENST00000406396 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
KDSR-202ENST00000406396 TONSLQ96HA7 1378 aa23.6■■□□□ 1.37
KDSR-202ENST00000406396 HNRNPUQ00839 825 aaKnown RBP eCLIP23.59■■□□□ 1.37
KDSR-202ENST00000406396 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
KDSR-202ENST00000406396 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
KDSR-202ENST00000406396 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
KDSR-202ENST00000406396 FAM9BQ8IZU0 186 aa23.5■■□□□ 1.35
KDSR-202ENST00000406396 EEA1Q15075 1411 aa23.44■■□□□ 1.34
KDSR-202ENST00000406396 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
KDSR-202ENST00000406396 EIF5BO60841 1220 aaKnown RBP23.4■■□□□ 1.34
KDSR-202ENST00000406396 ERCC6Q03468 1493 aa23.39■■□□□ 1.33
KDSR-202ENST00000406396 HSP90AA1P07900 732 aaKnown RBP23.37■■□□□ 1.33
KDSR-202ENST00000406396 SALL2Q9Y467 1007 aaPredicted RBP23.37■■□□□ 1.33
KDSR-202ENST00000406396 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
KDSR-202ENST00000406396 UPF2Q9HAU5 1272 aaKnown RBP23.36■■□□□ 1.33
KDSR-202ENST00000406396 CCDC136Q96JN2 1154 aa23.34■■□□□ 1.33
KDSR-202ENST00000406396 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
KDSR-202ENST00000406396 CLIP1P30622 1438 aa23.33■■□□□ 1.32
KDSR-202ENST00000406396 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
KDSR-202ENST00000406396 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
KDSR-202ENST00000406396 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
KDSR-202ENST00000406396 STAG3Q9UJ98 1225 aa23.3■■□□□ 1.32
KDSR-202ENST00000406396 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
KDSR-202ENST00000406396 MIER1Q8N108 512 aa23.29■■□□□ 1.32
KDSR-202ENST00000406396 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
KDSR-202ENST00000406396 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
KDSR-202ENST00000406396 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
KDSR-202ENST00000406396 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
KDSR-202ENST00000406396 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms