Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.446e-7■□□□□ 10.5
LSM11P83369 NEK3-201ENST00000550331 733 ntTSL 210.97□□□□□ -0.656e-7■□□□□ 10.5
LSM11P83369 NEK3-207ENST00000617054 3256 ntTSL 57.32□□□□□ -1.246e-7■□□□□ 10.5
LSM11P83369 NEK3-209ENST00000618856 544 ntTSL 57.25□□□□□ -1.256e-7■□□□□ 10.5
LSM11P83369 AMPD2-210ENST00000476688 1111 ntTSL 317.45■□□□□ 0.385e-8■□□□□ 10.5
LSM11P83369 AMPD2-220ENST00000528958 714 ntTSL 213.78□□□□□ -0.25e-8■□□□□ 10.5
LSM11P83369 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC11.98□□□□□ -0.495e-8■□□□□ 10.5
LSM11P83369 AMPD2-204ENST00000369840 3130 ntAPPRIS ALT2 TSL 510.05□□□□□ -0.85e-8■□□□□ 10.5
LSM11P83369 SRRM2-221ENST00000574866 638 ntTSL 316.02■□□□□ 0.163e-16■□□□□ 10.5
LSM11P83369 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.448e-8■□□□□ 10.5
LSM11P83369 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.478e-8■□□□□ 10.5
LSM11P83369 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.518e-8■□□□□ 10.5
LSM11P83369 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.642e-10■□□□□ 10.5
LSM11P83369 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.722e-10■□□□□ 10.5
LSM11P83369 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.758e-8■□□□□ 10.5
LSM11P83369 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)8.61□□□□□ -1.038e-8■□□□□ 10.5
LSM11P83369 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.52□□□□□ -1.378e-8■□□□□ 10.5
LSM11P83369 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.96□□□□□ -1.618e-8■□□□□ 10.5
LSM11P83369 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.84□□□□□ -1.648e-8■□□□□ 10.5
LSM11P83369 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.748e-8■□□□□ 10.5
LSM11P83369 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.788e-8■□□□□ 10.5
LSM11P83369 PLXNB1-211ENST00000470525 835 ntTSL 515.16■□□□□ 0.022e-8■□□□□ 10.5
LSM11P83369 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.48■□□□□ 0.391e-6■□□□□ 10.4
LSM11P83369 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.61e-6■□□□□ 10.4
LSM11P83369 SORBS3-204ENST00000517962 885 ntTSL 210.75□□□□□ -0.691e-6■□□□□ 10.4
LSM11P83369 BCYRN1-201ENST00000418539 200 ntBASIC13□□□□□ -0.336e-12■□□□□ 10.4
LSM11P83369 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.111e-12■□□□□ 10.4
LSM11P83369 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.029e-8■□□□□ 10.4
LSM11P83369 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC11.79□□□□□ -0.529e-8■□□□□ 10.4
LSM11P83369 PAH-213ENST00000551988 584 ntTSL 38.79□□□□□ -13e-6■□□□□ 10.4
LSM11P83369 PAH-207ENST00000549111 1252 ntTSL 1 (best)6.59□□□□□ -1.353e-6■□□□□ 10.4
LSM11P83369 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)19.64■□□□□ 0.732e-16■□□□□ 10.4
LSM11P83369 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)13.45□□□□□ -0.262e-16■□□□□ 10.4
LSM11P83369 SLC25A37-211ENST00000523883 3651 ntTSL 29.57□□□□□ -0.882e-16■□□□□ 10.4
LSM11P83369 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.382e-6■□□□□ 10.4
LSM11P83369 LTBP3-214ENST00000529582 1889 ntTSL 521.4■■□□□ 1.023e-7■□□□□ 10.4
LSM11P83369 ANKRD52-203ENST00000548241 651 ntTSL 311.64□□□□□ -0.556e-7■□□□□ 10.4
LSM11P83369 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.586e-7■□□□□ 10.4
LSM11P83369 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.946e-8■□□□□ 10.4
LSM11P83369 GPI-208ENST00000588991 2021 ntTSL 219.19■□□□□ 0.666e-8■□□□□ 10.4
LSM11P83369 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.35□□□□□ -0.116e-8■□□□□ 10.4
LSM11P83369 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.45□□□□□ -1.226e-8■□□□□ 10.4
LSM11P83369 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.1■■■□□ 2.096e-7■□□□□ 10.4
LSM11P83369 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.976e-7■□□□□ 10.4
LSM11P83369 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)16.74■□□□□ 0.276e-7■□□□□ 10.4
LSM11P83369 NT5DC2-209ENST00000478091 590 ntTSL 315.95■□□□□ 0.146e-7■□□□□ 10.4
LSM11P83369 NT5DC2-206ENST00000466112 887 ntTSL 215.47■□□□□ 0.076e-7■□□□□ 10.4
LSM11P83369 NT5DC2-213ENST00000489316 772 ntTSL 513.82□□□□□ -0.26e-7■□□□□ 10.4
LSM11P83369 NT5DC2-205ENST00000463947 670 ntTSL 311.78□□□□□ -0.526e-7■□□□□ 10.4
LSM11P83369 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.626e-7■□□□□ 10.4
LSM11P83369 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.13□□□□□ -0.318e-12■□□□□ 10.4
LSM11P83369 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.548e-12■□□□□ 10.4
LSM11P83369 SRC-207ENST00000477066 3300 ntTSL 211.63□□□□□ -0.558e-12■□□□□ 10.4
LSM11P83369 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.638e-12■□□□□ 10.4
LSM11P83369 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.688e-12■□□□□ 10.4
LSM11P83369 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.063e-9■□□□□ 10.4
LSM11P83369 INO80E-211ENST00000567987 1926 ntTSL 1 (best)17.32■□□□□ 0.363e-9■□□□□ 10.4
LSM11P83369 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.323e-9■□□□□ 10.4
LSM11P83369 INO80E-205ENST00000562441 1412 ntTSL 216.12■□□□□ 0.173e-9■□□□□ 10.4
LSM11P83369 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.163e-9■□□□□ 10.4
LSM11P83369 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.78■□□□□ 0.123e-9■□□□□ 10.4
LSM11P83369 RABGGTA-203ENST00000543002 1329 ntTSL 215.2■□□□□ 0.023e-9■□□□□ 10.4
LSM11P83369 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.6□□□□□ -0.073e-9■□□□□ 10.4
LSM11P83369 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.113e-9■□□□□ 10.4
LSM11P83369 RABGGTA-206ENST00000558649 768 ntTSL 213.97□□□□□ -0.173e-9■□□□□ 10.4
LSM11P83369 RABGGTA-219ENST00000560871 886 ntTSL 513.69□□□□□ -0.223e-9■□□□□ 10.4
LSM11P83369 INO80E-203ENST00000540562 3064 ntTSL 213.56□□□□□ -0.243e-9■□□□□ 10.4
LSM11P83369 RABGGTA-212ENST00000559974 1963 ntTSL 513.52□□□□□ -0.243e-9■□□□□ 10.4
LSM11P83369 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.51□□□□□ -0.253e-9■□□□□ 10.4
LSM11P83369 RABGGTA-209ENST00000559551 2060 ntTSL 513.16□□□□□ -0.33e-9■□□□□ 10.4
LSM11P83369 RABGGTA-211ENST00000559850 534 ntTSL 313.01□□□□□ -0.333e-9■□□□□ 10.4
LSM11P83369 EPHB4-206ENST00000487222 5058 ntTSL 1 (best)13□□□□□ -0.333e-9■□□□□ 10.4
LSM11P83369 RABGGTA-220ENST00000560998 1997 ntTSL 512.79□□□□□ -0.363e-9■□□□□ 10.4
LSM11P83369 INO80E-213ENST00000569957 4469 ntTSL 211.59□□□□□ -0.553e-9■□□□□ 10.4
LSM11P83369 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC11.17□□□□□ -0.623e-9■□□□□ 10.4
LSM11P83369 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC10.61□□□□□ -0.713e-9■□□□□ 10.4
LSM11P83369 RABGGTA-216ENST00000560243 704 ntTSL 510.17□□□□□ -0.783e-9■□□□□ 10.4
LSM11P83369 RABGGTA-204ENST00000558376 1883 ntTSL 510.06□□□□□ -0.83e-9■□□□□ 10.4
LSM11P83369 RABGGTA-217ENST00000560521 680 ntTSL 37.96□□□□□ -1.143e-9■□□□□ 10.4
LSM11P83369 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.591e-6■□□□□ 10.4
LSM11P83369 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.69■□□□□ 0.421e-6■□□□□ 10.4
LSM11P83369 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.24■□□□□ 0.031e-6■□□□□ 10.4
LSM11P83369 FADS3-208ENST00000529404 2379 ntTSL 214.25□□□□□ -0.131e-6■□□□□ 10.4
LSM11P83369 FADS3-206ENST00000527379 768 ntTSL 313.31□□□□□ -0.281e-6■□□□□ 10.4
LSM11P83369 FADS3-211ENST00000533676 5314 ntTSL 212.77□□□□□ -0.361e-6■□□□□ 10.4
LSM11P83369 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.025e-14■□□□□ 10.4
LSM11P83369 AHCY-204ENST00000480653 2211 ntTSL 214.44□□□□□ -0.15e-14■□□□□ 10.4
LSM11P83369 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.11□□□□□ -0.315e-14■□□□□ 10.4
LSM11P83369 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC10.66□□□□□ -0.75e-14■□□□□ 10.4
LSM11P83369 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.81■□□□□ 0.63e-7■□□□□ 10.4
LSM11P83369 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.473e-6■□□□□ 10.4
LSM11P83369 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.423e-6■□□□□ 10.4
LSM11P83369 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.113e-6■□□□□ 10.4
LSM11P83369 BABAM1-210ENST00000598567 534 ntAPPRIS ALT2 TSL 315.15■□□□□ 0.023e-6■□□□□ 10.4
LSM11P83369 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.013e-6■□□□□ 10.4
LSM11P83369 BABAM1-215ENST00000601232 690 ntTSL 514.9□□□□□ -0.023e-6■□□□□ 10.4
LSM11P83369 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.083e-6■□□□□ 10.4
LSM11P83369 BABAM1-204ENST00000594247 1004 ntTSL 511.63□□□□□ -0.553e-6■□□□□ 10.4
LSM11P83369 MAN2C1-213ENST00000563528 367 ntTSL 312.52□□□□□ -0.412e-9■□□□□ 10.4
LSM11P83369 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.011e-10■□□□□ 10.4
Retrieved 100 of 11,495 protein–RNA pairs in 58.5 ms