RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 NISCHQ9Y2I1 1504 aa51.97■■■■■ 5.91
LTBP3-214ENST00000529582 CCDC180Q9P1Z9 1646 aa45.24■■■■■ 4.83
LTBP3-214ENST00000529582 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
LTBP3-214ENST00000529582 DCAF1Q9Y4B6 1507 aa42.94■■■■■ 4.46
LTBP3-214ENST00000529582 DCAF8L2P0C7V8 631 aa42.86■■■■■ 4.45
LTBP3-214ENST00000529582 ABCC9O60706 1549 aa42.6■■■■■ 4.41
LTBP3-214ENST00000529582 SHROOM4Q9ULL8 1493 aa42.59■■■■■ 4.41
LTBP3-214ENST00000529582 MYO15BQ96JP2 1530 aa42.33■■■■■ 4.37
LTBP3-214ENST00000529582 NACADO15069 1562 aa42.05■■■■■ 4.32
LTBP3-214ENST00000529582 SCRIBQ14160 1630 aa41.67■■■■■ 4.26
LTBP3-214ENST00000529582 RB1CC1Q8TDY2 1594 aa41.65■■■■■ 4.26
LTBP3-214ENST00000529582 SUPT5HO00267 1087 aaKnown RBP41.07■■■■■ 4.16
LTBP3-214ENST00000529582 UNC13AQ9UPW8 1703 aa40.94■■■■■ 4.14
LTBP3-214ENST00000529582 BICRAQ9NZM4 1560 aa40.44■■■■■ 4.06
LTBP3-214ENST00000529582 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
LTBP3-214ENST00000529582 CECR2Q9BXF3 1484 aa40.41■■■■■ 4.06
LTBP3-214ENST00000529582 PABPN1Q86U42 306 aaKnown RBP eCLIP40.22■■■■■ 4.031e-7■■■□□ 15.3
LTBP3-214ENST00000529582 MROH2BQ7Z745 1585 aa40.19■■■■■ 4.02
LTBP3-214ENST00000529582 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
LTBP3-214ENST00000529582 SMARCA4P51532 1647 aa39.94■■■■□ 3.98
LTBP3-214ENST00000529582 WIZO95785 1651 aa39.91■■■■□ 3.98
LTBP3-214ENST00000529582 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
LTBP3-214ENST00000529582 CHIC1Q5VXU3 224 aa39.42■■■■□ 3.9
LTBP3-214ENST00000529582 PEG3Q9GZU2 1588 aa39.4■■■■□ 3.9
LTBP3-214ENST00000529582 ATAD2BQ9ULI0 1458 aa39.19■■■■□ 3.86
LTBP3-214ENST00000529582 EIF4G1Q04637 1599 aaKnown RBP39.18■■■■□ 3.86
LTBP3-214ENST00000529582 SMARCA2P51531 1590 aa39.17■■■■□ 3.86
LTBP3-214ENST00000529582 CCDC88BA6NC98 1476 aa39.07■■■■□ 3.84
LTBP3-214ENST00000529582 BAZ1BQ9UIG0 1483 aaKnown RBP38.99■■■■□ 3.83
LTBP3-214ENST00000529582 NCAPD3P42695 1498 aa38.8■■■■□ 3.8
LTBP3-214ENST00000529582 HMGXB3Q12766 1538 aa38.77■■■■□ 3.8
LTBP3-214ENST00000529582 TRIM41Q8WV44 630 aa38.57■■■■□ 3.76
LTBP3-214ENST00000529582 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
LTBP3-214ENST00000529582 ABCC8Q09428 1581 aa38.34■■■■□ 3.73
LTBP3-214ENST00000529582 WRNQ14191 1432 aaPredicted RBP eCLIP38.01■■■■□ 3.68
LTBP3-214ENST00000529582 CFTRP13569 1480 aa38.01■■■■□ 3.67
LTBP3-214ENST00000529582 LOC105371045A0A1W2PR82 267 aa37.95■■■■□ 3.67
LTBP3-214ENST00000529582 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
LTBP3-214ENST00000529582 FAM9AQ8IZU1 332 aaPredicted RBP37.91■■■■□ 3.66
LTBP3-214ENST00000529582 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
LTBP3-214ENST00000529582 CADPSQ9ULU8 1353 aa37.83■■■■□ 3.65
LTBP3-214ENST00000529582 TOP2BQ02880 1626 aa37.71■■■■□ 3.63
LTBP3-214ENST00000529582 BIVM-ERCC5R4GMW8 1640 aa37.68■■■■□ 3.62
LTBP3-214ENST00000529582 SOGA1O94964 1423 aa37.64■■■■□ 3.62
LTBP3-214ENST00000529582 CUX1P39880 1505 aa37.57■■■■□ 3.6
LTBP3-214ENST00000529582 EEA1Q15075 1411 aa37.55■■■■□ 3.6
LTBP3-214ENST00000529582 DNAJC5BQ9UF47 199 aa37.55■■■■□ 3.6
LTBP3-214ENST00000529582 RUSC2Q8N2Y8 1516 aa37.52■■■■□ 3.6
LTBP3-214ENST00000529582 NESP48681 1621 aa37.49■■■■□ 3.59
LTBP3-214ENST00000529582 LAMC3Q9Y6N6 1575 aa37.46■■■■□ 3.59
LTBP3-214ENST00000529582 FANCD2Q9BXW9 1451 aa37.43■■■■□ 3.58
LTBP3-214ENST00000529582 EHMT2Q96KQ7 1210 aa37.39■■■■□ 3.58
LTBP3-214ENST00000529582 CSRNP3Q8WYN3 585 aa37.35■■■■□ 3.57
LTBP3-214ENST00000529582 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
LTBP3-214ENST00000529582 DNMBPQ6XZF7 1577 aa37.15■■■■□ 3.54
LTBP3-214ENST00000529582 PDS5BQ9NTI5 1447 aa37.14■■■■□ 3.54
LTBP3-214ENST00000529582 KIF21BO75037 1637 aa37.11■■■■□ 3.53
LTBP3-214ENST00000529582 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
LTBP3-214ENST00000529582 GOLGA3Q08378 1498 aa37.08■■■■□ 3.53
LTBP3-214ENST00000529582 KIF21AQ7Z4S6 1674 aa37.07■■■■□ 3.53
LTBP3-214ENST00000529582 TOPBP1Q92547 1522 aa37.06■■■■□ 3.52
LTBP3-214ENST00000529582 KIF27Q86VH2 1401 aa37.02■■■■□ 3.52
LTBP3-214ENST00000529582 TNIKQ9UKE5 1360 aa36.99■■■■□ 3.51
LTBP3-214ENST00000529582 URB2Q14146 1524 aaKnown RBP36.98■■■■□ 3.51
LTBP3-214ENST00000529582 CUX2O14529 1486 aa36.9■■■■□ 3.5
LTBP3-214ENST00000529582 UBTFP17480 764 aaKnown RBP36.9■■■■□ 3.5
LTBP3-214ENST00000529582 POLA1P09884 1462 aaPredicted RBP36.89■■■■□ 3.5
LTBP3-214ENST00000529582 RAPGEF2Q9Y4G8 1499 aa36.86■■■■□ 3.49
LTBP3-214ENST00000529582 PRXQ9BXM0 1461 aa36.84■■■■□ 3.49
LTBP3-214ENST00000529582 CEP162Q5TB80 1403 aa36.83■■■■□ 3.49
LTBP3-214ENST00000529582 RAD54L2Q9Y4B4 1467 aa36.8■■■■□ 3.48
LTBP3-214ENST00000529582 ERICH3Q5RHP9 1530 aa36.8■■■■□ 3.48
LTBP3-214ENST00000529582 ABCA10Q8WWZ4 1543 aa36.77■■■■□ 3.48
LTBP3-214ENST00000529582 WDR97A6NE52 1622 aa36.69■■■■□ 3.46
LTBP3-214ENST00000529582 IGF1RP08069 1367 aa36.69■■■■□ 3.46
LTBP3-214ENST00000529582 MRC2Q9UBG0 1479 aa36.68■■■■□ 3.46
LTBP3-214ENST00000529582 TARBP1Q13395 1621 aaKnown RBP36.51■■■■□ 3.44
LTBP3-214ENST00000529582 CARMIL1Q5VZK9 1371 aa36.5■■■■□ 3.43
LTBP3-214ENST00000529582 CLIP1P30622 1438 aa36.49■■■■□ 3.43
LTBP3-214ENST00000529582 WDR62O43379 1518 aa36.49■■■■□ 3.43
LTBP3-214ENST00000529582 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
LTBP3-214ENST00000529582 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
LTBP3-214ENST00000529582 CUL7Q14999 1698 aa36.41■■■■□ 3.42
LTBP3-214ENST00000529582 PCGF6Q9BYE7 350 aa36.41■■■■□ 3.42
LTBP3-214ENST00000529582 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
LTBP3-214ENST00000529582 GAPVD1Q14C86 1478 aa36.37■■■■□ 3.41
LTBP3-214ENST00000529582 THOC2Q8NI27 1593 aaKnown RBP36.36■■■■□ 3.41
LTBP3-214ENST00000529582 TRIM26Q12899 539 aaPredicted RBP36.33■■■■□ 3.41
LTBP3-214ENST00000529582 RANGAP1P46060 587 aaPredicted RBP36.28■■■■□ 3.4
LTBP3-214ENST00000529582 IFT140Q96RY7 1462 aa36.26■■■■□ 3.39
LTBP3-214ENST00000529582 PBRM1Q86U86 1689 aa36.22■■■■□ 3.39
LTBP3-214ENST00000529582 VPS8Q8N3P4 1428 aa36.2■■■■□ 3.39
LTBP3-214ENST00000529582 PPARGC1BQ86YN6 1023 aaKnown RBP36.18■■■■□ 3.38
LTBP3-214ENST00000529582 AQRO60306 1485 aaKnown RBP eCLIP36.14■■■■□ 3.386e-7■■■□□ 15.2
LTBP3-214ENST00000529582 ARAP1Q96P48 1450 aa36.14■■■■□ 3.38
LTBP3-214ENST00000529582 ZNF608Q9ULD9 1512 aaPredicted RBP36.1■■■■□ 3.37
LTBP3-214ENST00000529582 ARHGAP35Q9NRY4 1499 aa36.08■■■■□ 3.37
LTBP3-214ENST00000529582 CTTNBP2Q8WZ74 1663 aa36.08■■■■□ 3.37
LTBP3-214ENST00000529582 GRIN2BQ13224 1484 aa36.04■■■■□ 3.36
LTBP3-214ENST00000529582 ADAMTS12P58397 1594 aa36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms