Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 NDUFS3-205ENST00000527178 269 ntTSL 28.24□□□□□ -1.095e-7■■□□□ 13.4
LARP4Q71RC2 RPL36A-205ENST00000465744 710 ntTSL 1 (best)10.83□□□□□ -0.683e-17■■□□□ 13.4
LARP4Q71RC2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.523e-17■■□□□ 13.4
LARP4Q71RC2 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.672e-7■■□□□ 13.4
LARP4Q71RC2 RFC4-201ENST00000296273 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.832e-7■■□□□ 13.4
LARP4Q71RC2 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC8.81□□□□□ -12e-7■■□□□ 13.4
LARP4Q71RC2 RFC4-204ENST00000417876 479 ntTSL 26.53□□□□□ -1.362e-7■■□□□ 13.4
LARP4Q71RC2 RFC4-212ENST00000479307 1043 ntTSL 26.4□□□□□ -1.382e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.459e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.449e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.72■□□□□ 0.439e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.36■□□□□ 0.379e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-206ENST00000562205 2223 ntTSL 216.03■□□□□ 0.169e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.19e-7■■□□□ 13.4
LARP4Q71RC2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.029e-7■■□□□ 13.4
LARP4Q71RC2 HM13-222ENST00000494153 757 ntTSL 512.48□□□□□ -0.419e-9■■□□□ 13.4
LARP4Q71RC2 HM13-221ENST00000493364 372 ntTSL 211.11□□□□□ -0.639e-9■■□□□ 13.4
LARP4Q71RC2 AES-206ENST00000586742 1666 ntTSL 317.29■□□□□ 0.365e-7■■□□□ 13.4
LARP4Q71RC2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.08■□□□□ 0.335e-7■■□□□ 13.4
LARP4Q71RC2 AES-212ENST00000592414 3274 ntTSL 212.32□□□□□ -0.445e-7■■□□□ 13.4
LARP4Q71RC2 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC11.18□□□□□ -0.622e-11■■□□□ 13.3
LARP4Q71RC2 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.88■□□□□ 0.771e-8■■□□□ 13.3
LARP4Q71RC2 LAMTOR1-205ENST00000539797 535 ntTSL 510.29□□□□□ -0.761e-12■■□□□ 13.3
LARP4Q71RC2 FAM178B-205ENST00000494172 592 ntTSL 316.54■□□□□ 0.244e-8■■□□□ 13.3
LARP4Q71RC2 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC11.11□□□□□ -0.631e-6■■□□□ 13.3
LARP4Q71RC2 OOEP-203ENST00000441145 964 ntTSL 39.52□□□□□ -0.891e-6■■□□□ 13.3
LARP4Q71RC2 AC019205.3-201ENST00000424573 156 ntBASIC3.24□□□□□ -1.891e-6■■□□□ 13.3
LARP4Q71RC2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.313e-7■■□□□ 13.3
LARP4Q71RC2 VKORC1-207ENST00000472468 461 ntTSL 215.85■□□□□ 0.138e-11■■□□□ 13.3
LARP4Q71RC2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.27■□□□□ 0.362e-7■■□□□ 13.3
LARP4Q71RC2 PSMD4-205ENST00000445776 703 ntTSL 315.5■□□□□ 0.072e-7■■□□□ 13.3
LARP4Q71RC2 PSMD4-203ENST00000427779 649 ntTSL 315.27■□□□□ 0.042e-7■■□□□ 13.3
LARP4Q71RC2 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.612e-7■■□□□ 13.3
LARP4Q71RC2 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.644e-8■■□□□ 13.3
LARP4Q71RC2 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC10.99□□□□□ -0.654e-8■■□□□ 13.3
LARP4Q71RC2 PHB-211ENST00000511933 852 ntTSL 210.74□□□□□ -0.694e-8■■□□□ 13.3
LARP4Q71RC2 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.764e-8■■□□□ 13.3
LARP4Q71RC2 PSMD4-206ENST00000453615 371 ntTSL 37.83□□□□□ -1.162e-7■■□□□ 13.3
LARP4Q71RC2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.394e-8■■□□□ 13.3
LARP4Q71RC2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.18e-10■■□□□ 13.3
LARP4Q71RC2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.469e-35■■□□□ 13.3
LARP4Q71RC2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.82□□□□□ -0.29e-35■■□□□ 13.3
LARP4Q71RC2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.581e-8■■□□□ 13.3
LARP4Q71RC2 DNPEP-204ENST00000373966 1875 ntTSL 520.61■□□□□ 0.891e-8■■□□□ 13.3
LARP4Q71RC2 DNPEP-203ENST00000373963 1657 ntTSL 518■□□□□ 0.471e-8■■□□□ 13.3
LARP4Q71RC2 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.41e-8■■□□□ 13.3
LARP4Q71RC2 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC12.38□□□□□ -0.431e-8■■□□□ 13.3
LARP4Q71RC2 DNPEP-214ENST00000490371 555 ntTSL 511.98□□□□□ -0.491e-8■■□□□ 13.3
LARP4Q71RC2 SH3BP5-204ENST00000412806 1900 ntTSL 521.23■□□□□ 0.994e-8■■□□□ 13.3
LARP4Q71RC2 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 519.96■□□□□ 0.794e-8■■□□□ 13.3
LARP4Q71RC2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.654e-8■■□□□ 13.3
LARP4Q71RC2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.424e-8■■□□□ 13.3
LARP4Q71RC2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.264e-8■■□□□ 13.3
LARP4Q71RC2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.052e-21■■□□□ 13.3
LARP4Q71RC2 ZFP62-203ENST00000506377 725 ntTSL 1 (best)14.3□□□□□ -0.124e-8■■□□□ 13.3
LARP4Q71RC2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.08□□□□□ -0.324e-8■■□□□ 13.3
LARP4Q71RC2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.374e-8■■□□□ 13.3
LARP4Q71RC2 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.51□□□□□ -0.573e-6■■□□□ 13.3
LARP4Q71RC2 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.582e-21■■□□□ 13.3
LARP4Q71RC2 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.43□□□□□ -0.583e-6■■□□□ 13.3
LARP4Q71RC2 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.773e-6■■□□□ 13.3
LARP4Q71RC2 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC9.44□□□□□ -0.94e-8■■□□□ 13.3
LARP4Q71RC2 KIAA0368-203ENST00000374383 573 ntAPPRIS ALT2 TSL 28.48□□□□□ -1.052e-21■■□□□ 13.3
LARP4Q71RC2 ZFP62-202ENST00000504225 749 ntTSL 28□□□□□ -1.134e-8■■□□□ 13.3
LARP4Q71RC2 ESYT2-204ENST00000483958 546 ntTSL 47.31□□□□□ -1.244e-8■■□□□ 13.3
LARP4Q71RC2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.34e-8■■□□□ 13.3
LARP4Q71RC2 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.83□□□□□ -1.324e-8■■□□□ 13.3
LARP4Q71RC2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.394e-8■■□□□ 13.3
LARP4Q71RC2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.05□□□□□ -1.443e-6■■□□□ 13.3
LARP4Q71RC2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.474e-8■■□□□ 13.3
LARP4Q71RC2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.484e-8■■□□□ 13.3
LARP4Q71RC2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.24□□□□□ -1.573e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.713e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.663e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.623e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.583e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-205ENST00000528236 2294 ntTSL 217.12■□□□□ 0.333e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-207ENST00000530437 1474 ntTSL 1 (best)13.78□□□□□ -0.23e-6■■□□□ 13.3
LARP4Q71RC2 LARGE2-209ENST00000531847 501 ntTSL 29.29□□□□□ -0.923e-6■■□□□ 13.3
LARP4Q71RC2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.538e-12■■□□□ 13.3
LARP4Q71RC2 RPS16-205ENST00000599705 407 ntTSL 38.96□□□□□ -0.984e-17■■□□□ 13.3
LARP4Q71RC2 RPS7-207ENST00000479123 511 ntTSL 1 (best)14.94□□□□□ -0.021e-9■■□□□ 13.3
LARP4Q71RC2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.431e-6■■□□□ 13.3
LARP4Q71RC2 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.481e-6■■□□□ 13.3
LARP4Q71RC2 GPX2-204ENST00000557323 778 ntTSL 35.82□□□□□ -1.484e-8■■□□□ 13.3
LARP4Q71RC2 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC12.28□□□□□ -0.443e-17■■□□□ 13.2
LARP4Q71RC2 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.694e-12■■□□□ 13.2
LARP4Q71RC2 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.694e-12■■□□□ 13.2
LARP4Q71RC2 SERPINA5-201ENST00000329597 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.754e-12■■□□□ 13.2
LARP4Q71RC2 RPL18-207ENST00000549533 666 ntTSL 215.62■□□□□ 0.091e-25■■□□□ 13.2
LARP4Q71RC2 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)22.75■■□□□ 1.233e-9■■□□□ 13.2
LARP4Q71RC2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.443e-9■■□□□ 13.2
LARP4Q71RC2 PDIA5-202ENST00000467157 2232 ntTSL 213.38□□□□□ -0.273e-9■■□□□ 13.2
LARP4Q71RC2 PDIA5-203ENST00000469649 722 ntTSL 55.54□□□□□ -1.523e-9■■□□□ 13.2
LARP4Q71RC2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.731e-6■■□□□ 13.2
LARP4Q71RC2 NDUFS3-204ENST00000525378 779 ntTSL 210.62□□□□□ -0.711e-6■■□□□ 13.2
LARP4Q71RC2 NDUFS3-203ENST00000525212 530 ntTSL 27.69□□□□□ -1.181e-6■■□□□ 13.2
LARP4Q71RC2 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC10.85□□□□□ -0.673e-17■■□□□ 13.2
LARP4Q71RC2 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.13□□□□□ -0.953e-17■■□□□ 13.2
LARP4Q71RC2 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC8.7□□□□□ -1.023e-17■■□□□ 13.2
Retrieved 100 of 15,922 protein–RNA pairs in 201.5 ms