RNA–Protein interactions for RNA: ENST00000562205.1

RNPS1-206, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2

Gene RNPS1, Length 2,223 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-206ENST00000562205 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
RNPS1-206ENST00000562205 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
RNPS1-206ENST00000562205 CCDC180Q9P1Z9 1646 aa28.36■■■□□ 2.13
RNPS1-206ENST00000562205 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
RNPS1-206ENST00000562205 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
RNPS1-206ENST00000562205 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
RNPS1-206ENST00000562205 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
RNPS1-206ENST00000562205 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
RNPS1-206ENST00000562205 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
RNPS1-206ENST00000562205 ABCC9O60706 1549 aa26.65■■□□□ 1.86
RNPS1-206ENST00000562205 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
RNPS1-206ENST00000562205 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
RNPS1-206ENST00000562205 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
RNPS1-206ENST00000562205 HRCP23327 699 aa26.26■■□□□ 1.79
RNPS1-206ENST00000562205 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
RNPS1-206ENST00000562205 NACADO15069 1562 aa26.18■■□□□ 1.78
RNPS1-206ENST00000562205 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
RNPS1-206ENST00000562205 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
RNPS1-206ENST00000562205 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
RNPS1-206ENST00000562205 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
RNPS1-206ENST00000562205 WIZO95785 1651 aa25.81■■□□□ 1.72
RNPS1-206ENST00000562205 PPARGC1BQ86YN6 1023 aaKnown RBP25.74■■□□□ 1.71
RNPS1-206ENST00000562205 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
RNPS1-206ENST00000562205 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
RNPS1-206ENST00000562205 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.7
RNPS1-206ENST00000562205 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
RNPS1-206ENST00000562205 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
RNPS1-206ENST00000562205 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
RNPS1-206ENST00000562205 SMARCA4P51532 1647 aa25.4■■□□□ 1.66
RNPS1-206ENST00000562205 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
RNPS1-206ENST00000562205 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
RNPS1-206ENST00000562205 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
RNPS1-206ENST00000562205 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
RNPS1-206ENST00000562205 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
RNPS1-206ENST00000562205 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
RNPS1-206ENST00000562205 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
RNPS1-206ENST00000562205 SOGA1O94964 1423 aa24.97■■□□□ 1.59
RNPS1-206ENST00000562205 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
RNPS1-206ENST00000562205 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
RNPS1-206ENST00000562205 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
RNPS1-206ENST00000562205 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.56
RNPS1-206ENST00000562205 EEA1Q15075 1411 aa24.8■■□□□ 1.56
RNPS1-206ENST00000562205 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
RNPS1-206ENST00000562205 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
RNPS1-206ENST00000562205 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
RNPS1-206ENST00000562205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.71■■□□□ 1.55
RNPS1-206ENST00000562205 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
RNPS1-206ENST00000562205 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
RNPS1-206ENST00000562205 GOLGA3Q08378 1498 aa24.66■■□□□ 1.54
RNPS1-206ENST00000562205 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
RNPS1-206ENST00000562205 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
RNPS1-206ENST00000562205 CCER1Q8TC90 406 aaPredicted RBP24.61■■□□□ 1.53
RNPS1-206ENST00000562205 KIF21BO75037 1637 aa24.53■■□□□ 1.52
RNPS1-206ENST00000562205 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
RNPS1-206ENST00000562205 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
RNPS1-206ENST00000562205 CLIP1P30622 1438 aa24.37■■□□□ 1.49
RNPS1-206ENST00000562205 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
RNPS1-206ENST00000562205 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
RNPS1-206ENST00000562205 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
RNPS1-206ENST00000562205 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
RNPS1-206ENST00000562205 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
RNPS1-206ENST00000562205 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
RNPS1-206ENST00000562205 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
RNPS1-206ENST00000562205 CUX1P39880 1505 aa24.14■■□□□ 1.45
RNPS1-206ENST00000562205 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
RNPS1-206ENST00000562205 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
RNPS1-206ENST00000562205 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
RNPS1-206ENST00000562205 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
RNPS1-206ENST00000562205 APLP2Q06481 763 aa24.07■■□□□ 1.44
RNPS1-206ENST00000562205 CFTRP13569 1480 aa24.04■■□□□ 1.44
RNPS1-206ENST00000562205 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
RNPS1-206ENST00000562205 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
RNPS1-206ENST00000562205 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
RNPS1-206ENST00000562205 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
RNPS1-206ENST00000562205 NEUROD1Q13562 356 aa23.95■■□□□ 1.42
RNPS1-206ENST00000562205 PRDM2Q13029 1718 aa23.91■■□□□ 1.42
RNPS1-206ENST00000562205 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
RNPS1-206ENST00000562205 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
RNPS1-206ENST00000562205 CENPBP07199 599 aaPredicted RBP23.77■■□□□ 1.4
RNPS1-206ENST00000562205 CUX2O14529 1486 aa23.76■■□□□ 1.39
RNPS1-206ENST00000562205 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
RNPS1-206ENST00000562205 IGF1RP08069 1367 aa23.73■■□□□ 1.39
RNPS1-206ENST00000562205 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
RNPS1-206ENST00000562205 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
RNPS1-206ENST00000562205 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
RNPS1-206ENST00000562205 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
RNPS1-206ENST00000562205 MIER1Q8N108 512 aa23.65■■□□□ 1.38
RNPS1-206ENST00000562205 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
RNPS1-206ENST00000562205 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
RNPS1-206ENST00000562205 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
RNPS1-206ENST00000562205 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
RNPS1-206ENST00000562205 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.37
RNPS1-206ENST00000562205 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
RNPS1-206ENST00000562205 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
RNPS1-206ENST00000562205 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
RNPS1-206ENST00000562205 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
RNPS1-206ENST00000562205 ITGAEP38570 1179 aa23.48■■□□□ 1.35
RNPS1-206ENST00000562205 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.35
RNPS1-206ENST00000562205 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
RNPS1-206ENST00000562205 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms