RNA–Protein interactions for RNA: ENST00000493364.1

HM13-221, Transcript of histocompatibility minor 13, humanhuman

TSL 2

Gene HM13, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-221ENST00000493364 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
HM13-221ENST00000493364 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.17
HM13-221ENST00000493364 ABCC9O60706 1549 aa21.9■■□□□ 1.1
HM13-221ENST00000493364 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
HM13-221ENST00000493364 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
HM13-221ENST00000493364 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
HM13-221ENST00000493364 NACADO15069 1562 aa21.02■□□□□ 0.96
HM13-221ENST00000493364 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
HM13-221ENST00000493364 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
HM13-221ENST00000493364 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
HM13-221ENST00000493364 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
HM13-221ENST00000493364 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
HM13-221ENST00000493364 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
HM13-221ENST00000493364 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
HM13-221ENST00000493364 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
HM13-221ENST00000493364 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
HM13-221ENST00000493364 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
HM13-221ENST00000493364 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
HM13-221ENST00000493364 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
HM13-221ENST00000493364 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
HM13-221ENST00000493364 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
HM13-221ENST00000493364 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
HM13-221ENST00000493364 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
HM13-221ENST00000493364 WIZO95785 1651 aa19.49■□□□□ 0.71
HM13-221ENST00000493364 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
HM13-221ENST00000493364 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
HM13-221ENST00000493364 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
HM13-221ENST00000493364 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
HM13-221ENST00000493364 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
HM13-221ENST00000493364 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
HM13-221ENST00000493364 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
HM13-221ENST00000493364 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
HM13-221ENST00000493364 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
HM13-221ENST00000493364 NESP48681 1621 aa18.92■□□□□ 0.62
HM13-221ENST00000493364 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
HM13-221ENST00000493364 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
HM13-221ENST00000493364 CUX2O14529 1486 aa18.84■□□□□ 0.61
HM13-221ENST00000493364 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
HM13-221ENST00000493364 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
HM13-221ENST00000493364 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
HM13-221ENST00000493364 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
HM13-221ENST00000493364 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
HM13-221ENST00000493364 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
HM13-221ENST00000493364 CFTRP13569 1480 aa18.69■□□□□ 0.58
HM13-221ENST00000493364 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
HM13-221ENST00000493364 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
HM13-221ENST00000493364 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
HM13-221ENST00000493364 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
HM13-221ENST00000493364 EEA1Q15075 1411 aa18.55■□□□□ 0.56
HM13-221ENST00000493364 WDR62O43379 1518 aa18.54■□□□□ 0.56
HM13-221ENST00000493364 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
HM13-221ENST00000493364 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
HM13-221ENST00000493364 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
HM13-221ENST00000493364 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
HM13-221ENST00000493364 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
HM13-221ENST00000493364 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
HM13-221ENST00000493364 CUX1P39880 1505 aa18.38■□□□□ 0.53
HM13-221ENST00000493364 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
HM13-221ENST00000493364 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
HM13-221ENST00000493364 SOGA1O94964 1423 aa18.32■□□□□ 0.52
HM13-221ENST00000493364 KIF21BO75037 1637 aa18.27■□□□□ 0.52
HM13-221ENST00000493364 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
HM13-221ENST00000493364 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
HM13-221ENST00000493364 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
HM13-221ENST00000493364 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
HM13-221ENST00000493364 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
HM13-221ENST00000493364 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
HM13-221ENST00000493364 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
HM13-221ENST00000493364 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
HM13-221ENST00000493364 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
HM13-221ENST00000493364 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
HM13-221ENST00000493364 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
HM13-221ENST00000493364 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
HM13-221ENST00000493364 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
HM13-221ENST00000493364 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
HM13-221ENST00000493364 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
HM13-221ENST00000493364 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
HM13-221ENST00000493364 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
HM13-221ENST00000493364 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
HM13-221ENST00000493364 RAPGEF2Q9Y4G8 1499 aa18■□□□□ 0.47
HM13-221ENST00000493364 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
HM13-221ENST00000493364 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
HM13-221ENST00000493364 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.475e-11■■■■□ 20.5
HM13-221ENST00000493364 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
HM13-221ENST00000493364 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
HM13-221ENST00000493364 CUL7Q14999 1698 aa17.95■□□□□ 0.46
HM13-221ENST00000493364 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
HM13-221ENST00000493364 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
HM13-221ENST00000493364 IGF1RP08069 1367 aa17.91■□□□□ 0.46
HM13-221ENST00000493364 CLIP1P30622 1438 aa17.88■□□□□ 0.45
HM13-221ENST00000493364 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
HM13-221ENST00000493364 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
HM13-221ENST00000493364 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
HM13-221ENST00000493364 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
HM13-221ENST00000493364 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
HM13-221ENST00000493364 CHD1O14646 1710 aa17.78■□□□□ 0.44
HM13-221ENST00000493364 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
HM13-221ENST00000493364 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
HM13-221ENST00000493364 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
HM13-221ENST00000493364 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms