RNA–Protein interactions for RNA: ENST00000561718.5

RNPS1-205, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 3 BASIC

Gene RNPS1, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-205ENST00000561718 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
RNPS1-205ENST00000561718 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
RNPS1-205ENST00000561718 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
RNPS1-205ENST00000561718 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
RNPS1-205ENST00000561718 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
RNPS1-205ENST00000561718 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
RNPS1-205ENST00000561718 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
RNPS1-205ENST00000561718 ABCC9O60706 1549 aa32.9■■■□□ 2.86
RNPS1-205ENST00000561718 NACADO15069 1562 aa32.65■■■□□ 2.82
RNPS1-205ENST00000561718 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
RNPS1-205ENST00000561718 SCRIBQ14160 1630 aa32.26■■■□□ 2.76
RNPS1-205ENST00000561718 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
RNPS1-205ENST00000561718 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
RNPS1-205ENST00000561718 RSF1Q96T23 1441 aaPredicted RBP31.36■■■□□ 2.61
RNPS1-205ENST00000561718 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
RNPS1-205ENST00000561718 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.6
RNPS1-205ENST00000561718 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
RNPS1-205ENST00000561718 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
RNPS1-205ENST00000561718 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.56
RNPS1-205ENST00000561718 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
RNPS1-205ENST00000561718 WIZO95785 1651 aa30.91■■■□□ 2.54
RNPS1-205ENST00000561718 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
RNPS1-205ENST00000561718 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
RNPS1-205ENST00000561718 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
RNPS1-205ENST00000561718 SMARCA2P51531 1590 aa30.43■■■□□ 2.46
RNPS1-205ENST00000561718 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
RNPS1-205ENST00000561718 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
RNPS1-205ENST00000561718 CCDC88BA6NC98 1476 aa30.27■■■□□ 2.44
RNPS1-205ENST00000561718 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
RNPS1-205ENST00000561718 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
RNPS1-205ENST00000561718 NCAPD3P42695 1498 aa30.1■■■□□ 2.41
RNPS1-205ENST00000561718 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
RNPS1-205ENST00000561718 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
RNPS1-205ENST00000561718 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
RNPS1-205ENST00000561718 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
RNPS1-205ENST00000561718 CFTRP13569 1480 aa29.49■■■□□ 2.31
RNPS1-205ENST00000561718 PRDM2Q13029 1718 aa29.44■■■□□ 2.3
RNPS1-205ENST00000561718 LOC105371045A0A1W2PR82 267 aa29.41■■■□□ 2.3
RNPS1-205ENST00000561718 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
RNPS1-205ENST00000561718 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
RNPS1-205ENST00000561718 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
RNPS1-205ENST00000561718 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
RNPS1-205ENST00000561718 EEA1Q15075 1411 aa29.3■■■□□ 2.28
RNPS1-205ENST00000561718 BIVM-ERCC5R4GMW8 1640 aa29.28■■■□□ 2.28
RNPS1-205ENST00000561718 SOGA1O94964 1423 aa29.19■■■□□ 2.26
RNPS1-205ENST00000561718 CUX1P39880 1505 aa29.12■■■□□ 2.25
RNPS1-205ENST00000561718 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
RNPS1-205ENST00000561718 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
RNPS1-205ENST00000561718 CSRNP3Q8WYN3 585 aa29.02■■■□□ 2.24
RNPS1-205ENST00000561718 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
RNPS1-205ENST00000561718 NESP48681 1621 aa28.95■■■□□ 2.22
RNPS1-205ENST00000561718 KIF21BO75037 1637 aa28.89■■■□□ 2.22
RNPS1-205ENST00000561718 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.22
RNPS1-205ENST00000561718 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
RNPS1-205ENST00000561718 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
RNPS1-205ENST00000561718 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
RNPS1-205ENST00000561718 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
RNPS1-205ENST00000561718 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
RNPS1-205ENST00000561718 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
RNPS1-205ENST00000561718 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
RNPS1-205ENST00000561718 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
RNPS1-205ENST00000561718 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
RNPS1-205ENST00000561718 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
RNPS1-205ENST00000561718 CEP162Q5TB80 1403 aa28.66■■■□□ 2.18
RNPS1-205ENST00000561718 KIF21AQ7Z4S6 1674 aa28.66■■■□□ 2.18
RNPS1-205ENST00000561718 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
RNPS1-205ENST00000561718 PRXQ9BXM0 1461 aa28.64■■■□□ 2.17
RNPS1-205ENST00000561718 CUX2O14529 1486 aa28.62■■■□□ 2.17
RNPS1-205ENST00000561718 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
RNPS1-205ENST00000561718 RAPGEF2Q9Y4G8 1499 aa28.61■■■□□ 2.17
RNPS1-205ENST00000561718 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
RNPS1-205ENST00000561718 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
RNPS1-205ENST00000561718 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
RNPS1-205ENST00000561718 WDR97A6NE52 1622 aa28.45■■■□□ 2.15
RNPS1-205ENST00000561718 IGF1RP08069 1367 aa28.45■■■□□ 2.14
RNPS1-205ENST00000561718 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
RNPS1-205ENST00000561718 CLIP1P30622 1438 aa28.39■■■□□ 2.13
RNPS1-205ENST00000561718 TRIM26Q12899 539 aaPredicted RBP28.36■■■□□ 2.13
RNPS1-205ENST00000561718 PCGF6Q9BYE7 350 aa28.34■■■□□ 2.13
RNPS1-205ENST00000561718 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
RNPS1-205ENST00000561718 CUL7Q14999 1698 aa28.31■■■□□ 2.12
RNPS1-205ENST00000561718 ABCA5Q8WWZ7 1642 aa28.31■■■□□ 2.12
RNPS1-205ENST00000561718 TARBP1Q13395 1621 aaKnown RBP28.29■■■□□ 2.12
RNPS1-205ENST00000561718 WDR62O43379 1518 aa28.28■■■□□ 2.12
RNPS1-205ENST00000561718 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
RNPS1-205ENST00000561718 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
RNPS1-205ENST00000561718 VPS8Q8N3P4 1428 aa28.19■■■□□ 2.1
RNPS1-205ENST00000561718 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
RNPS1-205ENST00000561718 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.09
RNPS1-205ENST00000561718 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
RNPS1-205ENST00000561718 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
RNPS1-205ENST00000561718 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
RNPS1-205ENST00000561718 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
RNPS1-205ENST00000561718 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
RNPS1-205ENST00000561718 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
RNPS1-205ENST00000561718 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
RNPS1-205ENST00000561718 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
RNPS1-205ENST00000561718 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.063e-7■■■■□ 22.2
RNPS1-205ENST00000561718 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
RNPS1-205ENST00000561718 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms