RNA–Protein interactions for RNA: ENST00000566458.5

RNPS1-220, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 1 (best) BASIC

Gene RNPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-220ENST00000566458 NISCHQ9Y2I1 1504 aa34.33■■■■□ 3.09
RNPS1-220ENST00000566458 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
RNPS1-220ENST00000566458 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
RNPS1-220ENST00000566458 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
RNPS1-220ENST00000566458 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
RNPS1-220ENST00000566458 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
RNPS1-220ENST00000566458 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
RNPS1-220ENST00000566458 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
RNPS1-220ENST00000566458 ABCC9O60706 1549 aa27.54■■■□□ 2
RNPS1-220ENST00000566458 NACADO15069 1562 aa27.45■■□□□ 1.98
RNPS1-220ENST00000566458 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
RNPS1-220ENST00000566458 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
RNPS1-220ENST00000566458 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
RNPS1-220ENST00000566458 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
RNPS1-220ENST00000566458 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
RNPS1-220ENST00000566458 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
RNPS1-220ENST00000566458 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.84
RNPS1-220ENST00000566458 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
RNPS1-220ENST00000566458 WIZO95785 1651 aa26.39■■□□□ 1.82
RNPS1-220ENST00000566458 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
RNPS1-220ENST00000566458 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
RNPS1-220ENST00000566458 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
RNPS1-220ENST00000566458 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
RNPS1-220ENST00000566458 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
RNPS1-220ENST00000566458 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
RNPS1-220ENST00000566458 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
RNPS1-220ENST00000566458 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
RNPS1-220ENST00000566458 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
RNPS1-220ENST00000566458 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
RNPS1-220ENST00000566458 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
RNPS1-220ENST00000566458 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
RNPS1-220ENST00000566458 FAM9AQ8IZU1 332 aaPredicted RBP25.53■■□□□ 1.68
RNPS1-220ENST00000566458 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
RNPS1-220ENST00000566458 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
RNPS1-220ENST00000566458 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
RNPS1-220ENST00000566458 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
RNPS1-220ENST00000566458 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
RNPS1-220ENST00000566458 SOGA1O94964 1423 aa25.18■■□□□ 1.62
RNPS1-220ENST00000566458 EEA1Q15075 1411 aa25.18■■□□□ 1.62
RNPS1-220ENST00000566458 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
RNPS1-220ENST00000566458 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
RNPS1-220ENST00000566458 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
RNPS1-220ENST00000566458 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
RNPS1-220ENST00000566458 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
RNPS1-220ENST00000566458 HRCP23327 699 aa25.02■■□□□ 1.6
RNPS1-220ENST00000566458 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
RNPS1-220ENST00000566458 CFTRP13569 1480 aa24.97■■□□□ 1.59
RNPS1-220ENST00000566458 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
RNPS1-220ENST00000566458 TNIKQ9UKE5 1360 aa24.94■■□□□ 1.58
RNPS1-220ENST00000566458 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
RNPS1-220ENST00000566458 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
RNPS1-220ENST00000566458 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
RNPS1-220ENST00000566458 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
RNPS1-220ENST00000566458 KIF21BO75037 1637 aa24.84■■□□□ 1.57
RNPS1-220ENST00000566458 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
RNPS1-220ENST00000566458 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
RNPS1-220ENST00000566458 CUX1P39880 1505 aa24.8■■□□□ 1.56
RNPS1-220ENST00000566458 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
RNPS1-220ENST00000566458 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
RNPS1-220ENST00000566458 RAPGEF2Q9Y4G8 1499 aa24.63■■□□□ 1.53
RNPS1-220ENST00000566458 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.53
RNPS1-220ENST00000566458 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
RNPS1-220ENST00000566458 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
RNPS1-220ENST00000566458 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
RNPS1-220ENST00000566458 CLIP1P30622 1438 aa24.51■■□□□ 1.51
RNPS1-220ENST00000566458 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
RNPS1-220ENST00000566458 FGD5Q6ZNL6 1462 aa24.42■■□□□ 1.5
RNPS1-220ENST00000566458 NESP48681 1621 aa24.38■■□□□ 1.49
RNPS1-220ENST00000566458 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
RNPS1-220ENST00000566458 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
RNPS1-220ENST00000566458 ZEB1P37275 1124 aaPredicted RBP24.37■■□□□ 1.49
RNPS1-220ENST00000566458 CUX2O14529 1486 aa24.37■■□□□ 1.49
RNPS1-220ENST00000566458 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
RNPS1-220ENST00000566458 IGF1RP08069 1367 aa24.33■■□□□ 1.49
RNPS1-220ENST00000566458 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
RNPS1-220ENST00000566458 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
RNPS1-220ENST00000566458 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
RNPS1-220ENST00000566458 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
RNPS1-220ENST00000566458 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
RNPS1-220ENST00000566458 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
RNPS1-220ENST00000566458 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
RNPS1-220ENST00000566458 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
RNPS1-220ENST00000566458 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
RNPS1-220ENST00000566458 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
RNPS1-220ENST00000566458 APLP2Q06481 763 aa24.13■■□□□ 1.45
RNPS1-220ENST00000566458 ARHGAP35Q9NRY4 1499 aa24.11■■□□□ 1.45
RNPS1-220ENST00000566458 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
RNPS1-220ENST00000566458 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
RNPS1-220ENST00000566458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
RNPS1-220ENST00000566458 CUL7Q14999 1698 aa24.03■■□□□ 1.44
RNPS1-220ENST00000566458 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
RNPS1-220ENST00000566458 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
RNPS1-220ENST00000566458 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
RNPS1-220ENST00000566458 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.42
RNPS1-220ENST00000566458 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
RNPS1-220ENST00000566458 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
RNPS1-220ENST00000566458 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
RNPS1-220ENST00000566458 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
RNPS1-220ENST00000566458 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.4
RNPS1-220ENST00000566458 HNRNPUL2Q1KMD3 747 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms