RNA–Protein interactions for RNA: ENST00000320225.9

RNPS1-202, Transcript of RNA binding protein with serine rich domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNPS1, Length 2,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-202ENST00000320225 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
RNPS1-202ENST00000320225 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
RNPS1-202ENST00000320225 HRCP23327 699 aa29.98■■■□□ 2.39
RNPS1-202ENST00000320225 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
RNPS1-202ENST00000320225 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
RNPS1-202ENST00000320225 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
RNPS1-202ENST00000320225 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
RNPS1-202ENST00000320225 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
RNPS1-202ENST00000320225 PCGF6Q9BYE7 350 aa29.36■■■□□ 2.29
RNPS1-202ENST00000320225 PPARGC1BQ86YN6 1023 aaKnown RBP29.28■■■□□ 2.28
RNPS1-202ENST00000320225 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
RNPS1-202ENST00000320225 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
RNPS1-202ENST00000320225 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.19
RNPS1-202ENST00000320225 TRIM26Q12899 539 aaPredicted RBP28.59■■■□□ 2.17
RNPS1-202ENST00000320225 PELP1Q8IZL8 1130 aaKnown RBP28.39■■■□□ 2.14
RNPS1-202ENST00000320225 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
RNPS1-202ENST00000320225 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
RNPS1-202ENST00000320225 ABCC9O60706 1549 aa27.97■■■□□ 2.07
RNPS1-202ENST00000320225 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
RNPS1-202ENST00000320225 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
RNPS1-202ENST00000320225 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
RNPS1-202ENST00000320225 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
RNPS1-202ENST00000320225 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
RNPS1-202ENST00000320225 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
RNPS1-202ENST00000320225 NEUROD1Q13562 356 aa27.49■■□□□ 1.99
RNPS1-202ENST00000320225 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
RNPS1-202ENST00000320225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.32■■□□□ 1.96
RNPS1-202ENST00000320225 NACADO15069 1562 aa27.28■■□□□ 1.96
RNPS1-202ENST00000320225 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
RNPS1-202ENST00000320225 GTF3C3Q9Y5Q9 886 aa27.25■■□□□ 1.95
RNPS1-202ENST00000320225 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
RNPS1-202ENST00000320225 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
RNPS1-202ENST00000320225 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
RNPS1-202ENST00000320225 MYT1Q01538 1121 aa27.17■■□□□ 1.94
RNPS1-202ENST00000320225 CENPBP07199 599 aaPredicted RBP27.12■■□□□ 1.93
RNPS1-202ENST00000320225 WIZO95785 1651 aa27.07■■□□□ 1.92
RNPS1-202ENST00000320225 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
RNPS1-202ENST00000320225 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
RNPS1-202ENST00000320225 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.89
RNPS1-202ENST00000320225 ZNF316A6NFI3 1004 aaPredicted RBP26.78■■□□□ 1.88
RNPS1-202ENST00000320225 CEP162Q5TB80 1403 aa26.72■■□□□ 1.87
RNPS1-202ENST00000320225 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
RNPS1-202ENST00000320225 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
RNPS1-202ENST00000320225 ABCC8Q09428 1581 aa26.62■■□□□ 1.85
RNPS1-202ENST00000320225 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
RNPS1-202ENST00000320225 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
RNPS1-202ENST00000320225 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
RNPS1-202ENST00000320225 SMARCA4P51532 1647 aa26.57■■□□□ 1.84
RNPS1-202ENST00000320225 MIER1Q8N108 512 aa26.57■■□□□ 1.84
RNPS1-202ENST00000320225 SOGA1O94964 1423 aa26.52■■□□□ 1.84
RNPS1-202ENST00000320225 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
RNPS1-202ENST00000320225 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
RNPS1-202ENST00000320225 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
RNPS1-202ENST00000320225 EEA1Q15075 1411 aa26.38■■□□□ 1.81
RNPS1-202ENST00000320225 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
RNPS1-202ENST00000320225 GOLGA3Q08378 1498 aa26.28■■□□□ 1.8
RNPS1-202ENST00000320225 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
RNPS1-202ENST00000320225 HNRNPUL2Q1KMD3 747 aaKnown RBP26.22■■□□□ 1.79
RNPS1-202ENST00000320225 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
RNPS1-202ENST00000320225 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
RNPS1-202ENST00000320225 KIF21BO75037 1637 aa26.08■■□□□ 1.77
RNPS1-202ENST00000320225 SUPT16HQ9Y5B9 1047 aaKnown RBP26.08■■□□□ 1.77
RNPS1-202ENST00000320225 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
RNPS1-202ENST00000320225 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
RNPS1-202ENST00000320225 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
RNPS1-202ENST00000320225 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
RNPS1-202ENST00000320225 CLIP1P30622 1438 aa26.03■■□□□ 1.76
RNPS1-202ENST00000320225 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
RNPS1-202ENST00000320225 TSHZ2Q9NRE2 1034 aa25.91■■□□□ 1.74
RNPS1-202ENST00000320225 DHX57Q6P158 1386 aaKnown RBP25.91■■□□□ 1.74
RNPS1-202ENST00000320225 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
RNPS1-202ENST00000320225 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.72
RNPS1-202ENST00000320225 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
RNPS1-202ENST00000320225 ANP32EQ9BTT0 268 aa25.78■■□□□ 1.72
RNPS1-202ENST00000320225 APLP2Q06481 763 aa25.75■■□□□ 1.71
RNPS1-202ENST00000320225 CUX2O14529 1486 aa25.62■■□□□ 1.69
RNPS1-202ENST00000320225 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
RNPS1-202ENST00000320225 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
RNPS1-202ENST00000320225 KCNH8Q96L42 1107 aa25.59■■□□□ 1.69
RNPS1-202ENST00000320225 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
RNPS1-202ENST00000320225 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
RNPS1-202ENST00000320225 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
RNPS1-202ENST00000320225 BCL11AQ9H165 835 aa25.5■■□□□ 1.67
RNPS1-202ENST00000320225 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
RNPS1-202ENST00000320225 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
RNPS1-202ENST00000320225 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
RNPS1-202ENST00000320225 MAPKBP1O60336 1514 aa25.42■■□□□ 1.66
RNPS1-202ENST00000320225 BCANQ96GW7 911 aa25.39■■□□□ 1.66
RNPS1-202ENST00000320225 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
RNPS1-202ENST00000320225 FKBP8Q14318 412 aa25.36■■□□□ 1.65
RNPS1-202ENST00000320225 CUX1P39880 1505 aa25.3■■□□□ 1.64
RNPS1-202ENST00000320225 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
RNPS1-202ENST00000320225 RAB3GAP2Q9H2M9 1393 aa25.29■■□□□ 1.64
RNPS1-202ENST00000320225 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
RNPS1-202ENST00000320225 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
RNPS1-202ENST00000320225 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
RNPS1-202ENST00000320225 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
RNPS1-202ENST00000320225 ARHGAP35Q9NRY4 1499 aa25.23■■□□□ 1.63
RNPS1-202ENST00000320225 DDX10Q13206 875 aaKnown RBP25.22■■□□□ 1.63
RNPS1-202ENST00000320225 ITGAEP38570 1179 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms