RNA–Protein interactions for RNA: ENST00000566397.5

RNPS1-219, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2 BASIC

Gene RNPS1, Length 1,685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-219ENST00000566397 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
RNPS1-219ENST00000566397 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
RNPS1-219ENST00000566397 ABCC9O60706 1549 aa36.25■■■■□ 3.39
RNPS1-219ENST00000566397 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
RNPS1-219ENST00000566397 DCAF8L2P0C7V8 631 aa35.58■■■■□ 3.29
RNPS1-219ENST00000566397 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
RNPS1-219ENST00000566397 NACADO15069 1562 aa35.27■■■■□ 3.24
RNPS1-219ENST00000566397 MYO15BQ96JP2 1530 aa35.26■■■■□ 3.23
RNPS1-219ENST00000566397 RB1CC1Q8TDY2 1594 aa35.15■■■■□ 3.22
RNPS1-219ENST00000566397 SCRIBQ14160 1630 aa34.53■■■■□ 3.12
RNPS1-219ENST00000566397 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
RNPS1-219ENST00000566397 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
RNPS1-219ENST00000566397 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
RNPS1-219ENST00000566397 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.04
RNPS1-219ENST00000566397 CECR2Q9BXF3 1484 aa33.28■■■□□ 2.92
RNPS1-219ENST00000566397 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
RNPS1-219ENST00000566397 EIF4G1Q04637 1599 aaKnown RBP33.11■■■□□ 2.89
RNPS1-219ENST00000566397 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
RNPS1-219ENST00000566397 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
RNPS1-219ENST00000566397 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
RNPS1-219ENST00000566397 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
RNPS1-219ENST00000566397 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
RNPS1-219ENST00000566397 WIZO95785 1651 aa32.72■■■□□ 2.83
RNPS1-219ENST00000566397 PEG3Q9GZU2 1588 aa32.68■■■□□ 2.82
RNPS1-219ENST00000566397 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
RNPS1-219ENST00000566397 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
RNPS1-219ENST00000566397 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
RNPS1-219ENST00000566397 NCAPD3P42695 1498 aa32.53■■■□□ 2.8
RNPS1-219ENST00000566397 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
RNPS1-219ENST00000566397 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
RNPS1-219ENST00000566397 TOP2AP11388 1531 aaKnown RBP32.38■■■□□ 2.77
RNPS1-219ENST00000566397 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
RNPS1-219ENST00000566397 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
RNPS1-219ENST00000566397 CFTRP13569 1480 aa31.61■■■□□ 2.65
RNPS1-219ENST00000566397 NESP48681 1621 aa31.58■■■□□ 2.65
RNPS1-219ENST00000566397 LAMC3Q9Y6N6 1575 aa31.57■■■□□ 2.65
RNPS1-219ENST00000566397 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
RNPS1-219ENST00000566397 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
RNPS1-219ENST00000566397 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
RNPS1-219ENST00000566397 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
RNPS1-219ENST00000566397 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
RNPS1-219ENST00000566397 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
RNPS1-219ENST00000566397 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
RNPS1-219ENST00000566397 WRNQ14191 1432 aaPredicted RBP eCLIP31.02■■■□□ 2.56
RNPS1-219ENST00000566397 MRC2Q9UBG0 1479 aa30.98■■■□□ 2.55
RNPS1-219ENST00000566397 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
RNPS1-219ENST00000566397 CUX1P39880 1505 aa30.92■■■□□ 2.54
RNPS1-219ENST00000566397 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
RNPS1-219ENST00000566397 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
RNPS1-219ENST00000566397 DNMBPQ6XZF7 1577 aa30.9■■■□□ 2.54
RNPS1-219ENST00000566397 THOC2Q8NI27 1593 aaKnown RBP30.9■■■□□ 2.54
RNPS1-219ENST00000566397 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
RNPS1-219ENST00000566397 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
RNPS1-219ENST00000566397 WDR62O43379 1518 aa30.84■■■□□ 2.53
RNPS1-219ENST00000566397 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
RNPS1-219ENST00000566397 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
RNPS1-219ENST00000566397 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
RNPS1-219ENST00000566397 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
RNPS1-219ENST00000566397 SOGA1O94964 1423 aa30.57■■■□□ 2.48
RNPS1-219ENST00000566397 CUX2O14529 1486 aa30.56■■■□□ 2.48
RNPS1-219ENST00000566397 RAD54L2Q9Y4B4 1467 aa30.55■■■□□ 2.48
RNPS1-219ENST00000566397 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
RNPS1-219ENST00000566397 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
RNPS1-219ENST00000566397 ABCA10Q8WWZ4 1543 aa30.43■■■□□ 2.46
RNPS1-219ENST00000566397 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
RNPS1-219ENST00000566397 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
RNPS1-219ENST00000566397 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
RNPS1-219ENST00000566397 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
RNPS1-219ENST00000566397 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
RNPS1-219ENST00000566397 AQRO60306 1485 aaKnown RBP eCLIP30.25■■■□□ 2.432e-7■■■■□ 21.2
RNPS1-219ENST00000566397 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
RNPS1-219ENST00000566397 FAM9AQ8IZU1 332 aaPredicted RBP30.23■■■□□ 2.43
RNPS1-219ENST00000566397 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
RNPS1-219ENST00000566397 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
RNPS1-219ENST00000566397 EEA1Q15075 1411 aa30.2■■■□□ 2.42
RNPS1-219ENST00000566397 PBRM1Q86U86 1689 aa30.12■■■□□ 2.41
RNPS1-219ENST00000566397 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
RNPS1-219ENST00000566397 CSRNP3Q8WYN3 585 aa30.08■■■□□ 2.41
RNPS1-219ENST00000566397 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
RNPS1-219ENST00000566397 IGF1RP08069 1367 aa30.07■■■□□ 2.4
RNPS1-219ENST00000566397 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
RNPS1-219ENST00000566397 CUL7Q14999 1698 aa29.96■■■□□ 2.39
RNPS1-219ENST00000566397 MAGI1Q96QZ7 1491 aaPredicted RBP29.94■■■□□ 2.38
RNPS1-219ENST00000566397 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
RNPS1-219ENST00000566397 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
RNPS1-219ENST00000566397 PRXQ9BXM0 1461 aa29.89■■■□□ 2.37
RNPS1-219ENST00000566397 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.37
RNPS1-219ENST00000566397 KIF21BO75037 1637 aa29.84■■■□□ 2.37
RNPS1-219ENST00000566397 RAPGEF2Q9Y4G8 1499 aa29.83■■■□□ 2.37
RNPS1-219ENST00000566397 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
RNPS1-219ENST00000566397 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
RNPS1-219ENST00000566397 FBLN2P98095 1184 aa29.8■■■□□ 2.36
RNPS1-219ENST00000566397 CHMP7Q8WUX9 453 aaPredicted RBP29.79■■■□□ 2.36
RNPS1-219ENST00000566397 GOLGA3Q08378 1498 aa29.75■■■□□ 2.35
RNPS1-219ENST00000566397 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
RNPS1-219ENST00000566397 CHD1O14646 1710 aa29.72■■■□□ 2.35
RNPS1-219ENST00000566397 LOC105371045A0A1W2PR82 267 aa29.69■■■□□ 2.34
RNPS1-219ENST00000566397 UBTFP17480 764 aaKnown RBP29.66■■■□□ 2.34
RNPS1-219ENST00000566397 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
RNPS1-219ENST00000566397 NUP160Q12769 1436 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms