RNA–Protein interactions for RNA: ENST00000453615.1

PSMD4-206, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-206ENST00000453615 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
PSMD4-206ENST00000453615 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
PSMD4-206ENST00000453615 ABCC9O60706 1549 aa18.85■□□□□ 0.61
PSMD4-206ENST00000453615 RB1CC1Q8TDY2 1594 aa18.02■□□□□ 0.48
PSMD4-206ENST00000453615 NACADO15069 1562 aa17.91■□□□□ 0.46
PSMD4-206ENST00000453615 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
PSMD4-206ENST00000453615 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
PSMD4-206ENST00000453615 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
PSMD4-206ENST00000453615 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
PSMD4-206ENST00000453615 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
PSMD4-206ENST00000453615 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.39
PSMD4-206ENST00000453615 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
PSMD4-206ENST00000453615 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
PSMD4-206ENST00000453615 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
PSMD4-206ENST00000453615 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
PSMD4-206ENST00000453615 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
PSMD4-206ENST00000453615 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
PSMD4-206ENST00000453615 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
PSMD4-206ENST00000453615 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
PSMD4-206ENST00000453615 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
PSMD4-206ENST00000453615 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
PSMD4-206ENST00000453615 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
PSMD4-206ENST00000453615 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
PSMD4-206ENST00000453615 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
PSMD4-206ENST00000453615 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
PSMD4-206ENST00000453615 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
PSMD4-206ENST00000453615 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
PSMD4-206ENST00000453615 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
PSMD4-206ENST00000453615 CUX2O14529 1486 aa16.25■□□□□ 0.19
PSMD4-206ENST00000453615 NESP48681 1621 aa16.19■□□□□ 0.18
PSMD4-206ENST00000453615 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
PSMD4-206ENST00000453615 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
PSMD4-206ENST00000453615 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
PSMD4-206ENST00000453615 WIZO95785 1651 aa16.06■□□□□ 0.16
PSMD4-206ENST00000453615 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
PSMD4-206ENST00000453615 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.15
PSMD4-206ENST00000453615 THOC2Q8NI27 1593 aaKnown RBP15.99■□□□□ 0.15
PSMD4-206ENST00000453615 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
PSMD4-206ENST00000453615 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
PSMD4-206ENST00000453615 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
PSMD4-206ENST00000453615 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
PSMD4-206ENST00000453615 CFTRP13569 1480 aa15.88■□□□□ 0.13
PSMD4-206ENST00000453615 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
PSMD4-206ENST00000453615 WDR62O43379 1518 aa15.84■□□□□ 0.13
PSMD4-206ENST00000453615 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
PSMD4-206ENST00000453615 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
PSMD4-206ENST00000453615 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
PSMD4-206ENST00000453615 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
PSMD4-206ENST00000453615 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
PSMD4-206ENST00000453615 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
PSMD4-206ENST00000453615 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
PSMD4-206ENST00000453615 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
PSMD4-206ENST00000453615 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
PSMD4-206ENST00000453615 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
PSMD4-206ENST00000453615 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
PSMD4-206ENST00000453615 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
PSMD4-206ENST00000453615 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
PSMD4-206ENST00000453615 SOGA1O94964 1423 aa15.37■□□□□ 0.05
PSMD4-206ENST00000453615 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
PSMD4-206ENST00000453615 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
PSMD4-206ENST00000453615 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
PSMD4-206ENST00000453615 FBLN2P98095 1184 aa15.32■□□□□ 0.04
PSMD4-206ENST00000453615 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
PSMD4-206ENST00000453615 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
PSMD4-206ENST00000453615 CUX1P39880 1505 aa15.3■□□□□ 0.04
PSMD4-206ENST00000453615 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
PSMD4-206ENST00000453615 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
PSMD4-206ENST00000453615 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
PSMD4-206ENST00000453615 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
PSMD4-206ENST00000453615 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
PSMD4-206ENST00000453615 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
PSMD4-206ENST00000453615 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
PSMD4-206ENST00000453615 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
PSMD4-206ENST00000453615 MAGI1Q96QZ7 1491 aaPredicted RBP15.22■□□□□ 0.03
PSMD4-206ENST00000453615 CHD1O14646 1710 aa15.21■□□□□ 0.03
PSMD4-206ENST00000453615 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
PSMD4-206ENST00000453615 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
PSMD4-206ENST00000453615 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
PSMD4-206ENST00000453615 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
PSMD4-206ENST00000453615 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
PSMD4-206ENST00000453615 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
PSMD4-206ENST00000453615 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
PSMD4-206ENST00000453615 ABCA5Q8WWZ7 1642 aa15.09■□□□□ 0.01
PSMD4-206ENST00000453615 ARAP1Q96P48 1450 aa15.08■□□□□ 0.01
PSMD4-206ENST00000453615 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
PSMD4-206ENST00000453615 PBRM1Q86U86 1689 aa15.07■□□□□ 0
PSMD4-206ENST00000453615 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
PSMD4-206ENST00000453615 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
PSMD4-206ENST00000453615 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
PSMD4-206ENST00000453615 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
PSMD4-206ENST00000453615 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
PSMD4-206ENST00000453615 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
PSMD4-206ENST00000453615 NUP160Q12769 1436 aa14.95□□□□□ -0.02
PSMD4-206ENST00000453615 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
PSMD4-206ENST00000453615 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
PSMD4-206ENST00000453615 JPH4Q96JJ6 628 aa14.83□□□□□ -0.04
PSMD4-206ENST00000453615 SHROOM2Q13796 1616 aa14.83□□□□□ -0.04
PSMD4-206ENST00000453615 PRG4Q92954 1404 aaPredicted RBP14.83□□□□□ -0.04
PSMD4-206ENST00000453615 IGF1RP08069 1367 aa14.82□□□□□ -0.04
PSMD4-206ENST00000453615 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms