RNA–Protein interactions for RNA: ENST00000397086.6

RNPS1-203, Transcript of RNA binding protein with serine rich domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNPS1, Length 2,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-203ENST00000397086 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
RNPS1-203ENST00000397086 CCDC180Q9P1Z9 1646 aa33.37■■■□□ 2.93
RNPS1-203ENST00000397086 ZCCHC6Q5VYS8 1495 aaKnown RBP32.69■■■□□ 2.82
RNPS1-203ENST00000397086 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
RNPS1-203ENST00000397086 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
RNPS1-203ENST00000397086 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
RNPS1-203ENST00000397086 MYO15BQ96JP2 1530 aa31.35■■■□□ 2.61
RNPS1-203ENST00000397086 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
RNPS1-203ENST00000397086 NACADO15069 1562 aa30.91■■■□□ 2.54
RNPS1-203ENST00000397086 ABCC9O60706 1549 aa30.88■■■□□ 2.53
RNPS1-203ENST00000397086 SCRIBQ14160 1630 aa30.81■■■□□ 2.52
RNPS1-203ENST00000397086 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
RNPS1-203ENST00000397086 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
RNPS1-203ENST00000397086 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
RNPS1-203ENST00000397086 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.39
RNPS1-203ENST00000397086 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
RNPS1-203ENST00000397086 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
RNPS1-203ENST00000397086 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
RNPS1-203ENST00000397086 WIZO95785 1651 aa29.71■■■□□ 2.35
RNPS1-203ENST00000397086 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
RNPS1-203ENST00000397086 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
RNPS1-203ENST00000397086 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
RNPS1-203ENST00000397086 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
RNPS1-203ENST00000397086 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
RNPS1-203ENST00000397086 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
RNPS1-203ENST00000397086 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
RNPS1-203ENST00000397086 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.27
RNPS1-203ENST00000397086 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
RNPS1-203ENST00000397086 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
RNPS1-203ENST00000397086 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
RNPS1-203ENST00000397086 FAM9AQ8IZU1 332 aaPredicted RBP28.85■■■□□ 2.21
RNPS1-203ENST00000397086 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
RNPS1-203ENST00000397086 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
RNPS1-203ENST00000397086 PCGF6Q9BYE7 350 aa28.74■■■□□ 2.19
RNPS1-203ENST00000397086 HRCP23327 699 aa28.57■■■□□ 2.16
RNPS1-203ENST00000397086 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
RNPS1-203ENST00000397086 EEA1Q15075 1411 aa28.57■■■□□ 2.16
RNPS1-203ENST00000397086 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
RNPS1-203ENST00000397086 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
RNPS1-203ENST00000397086 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
RNPS1-203ENST00000397086 SOGA1O94964 1423 aa28.42■■■□□ 2.14
RNPS1-203ENST00000397086 EHMT2Q96KQ7 1210 aa28.4■■■□□ 2.14
RNPS1-203ENST00000397086 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
RNPS1-203ENST00000397086 CSRNP3Q8WYN3 585 aa28.31■■■□□ 2.12
RNPS1-203ENST00000397086 TNIKQ9UKE5 1360 aa28.25■■■□□ 2.11
RNPS1-203ENST00000397086 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
RNPS1-203ENST00000397086 TOP2BQ02880 1626 aa28.2■■■□□ 2.11
RNPS1-203ENST00000397086 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
RNPS1-203ENST00000397086 CEP162Q5TB80 1403 aa28.16■■■□□ 2.1
RNPS1-203ENST00000397086 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
RNPS1-203ENST00000397086 CFTRP13569 1480 aa28.13■■■□□ 2.09
RNPS1-203ENST00000397086 KIF21BO75037 1637 aa28.12■■■□□ 2.09
RNPS1-203ENST00000397086 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
RNPS1-203ENST00000397086 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
RNPS1-203ENST00000397086 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
RNPS1-203ENST00000397086 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
RNPS1-203ENST00000397086 CUX1P39880 1505 aa27.94■■■□□ 2.06
RNPS1-203ENST00000397086 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
RNPS1-203ENST00000397086 ZEB1P37275 1124 aaPredicted RBP27.85■■■□□ 2.05
RNPS1-203ENST00000397086 RAPGEF2Q9Y4G8 1499 aa27.82■■■□□ 2.04
RNPS1-203ENST00000397086 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
RNPS1-203ENST00000397086 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
RNPS1-203ENST00000397086 CLIP1P30622 1438 aa27.76■■■□□ 2.04
RNPS1-203ENST00000397086 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
RNPS1-203ENST00000397086 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
RNPS1-203ENST00000397086 VPS8Q8N3P4 1428 aa27.64■■■□□ 2.02
RNPS1-203ENST00000397086 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
RNPS1-203ENST00000397086 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
RNPS1-203ENST00000397086 CUX2O14529 1486 aa27.49■■□□□ 1.99
RNPS1-203ENST00000397086 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
RNPS1-203ENST00000397086 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
RNPS1-203ENST00000397086 IGF1RP08069 1367 aa27.41■■□□□ 1.98
RNPS1-203ENST00000397086 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
RNPS1-203ENST00000397086 APLP2Q06481 763 aa27.39■■□□□ 1.97
RNPS1-203ENST00000397086 ARAP1Q96P48 1450 aa27.39■■□□□ 1.97
RNPS1-203ENST00000397086 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
RNPS1-203ENST00000397086 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
RNPS1-203ENST00000397086 NESP48681 1621 aa27.35■■□□□ 1.97
RNPS1-203ENST00000397086 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
RNPS1-203ENST00000397086 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
RNPS1-203ENST00000397086 RANGAP1P46060 587 aaPredicted RBP27.29■■□□□ 1.96
RNPS1-203ENST00000397086 CCER1Q8TC90 406 aaPredicted RBP27.29■■□□□ 1.96
RNPS1-203ENST00000397086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
RNPS1-203ENST00000397086 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
RNPS1-203ENST00000397086 ARHGAP35Q9NRY4 1499 aa27.24■■□□□ 1.95
RNPS1-203ENST00000397086 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
RNPS1-203ENST00000397086 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
RNPS1-203ENST00000397086 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
RNPS1-203ENST00000397086 CUL7Q14999 1698 aa27.13■■□□□ 1.93
RNPS1-203ENST00000397086 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
RNPS1-203ENST00000397086 MAP3K1Q13233 1512 aa27.03■■□□□ 1.92
RNPS1-203ENST00000397086 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
RNPS1-203ENST00000397086 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
RNPS1-203ENST00000397086 HNRNPUL2Q1KMD3 747 aaKnown RBP26.97■■□□□ 1.91
RNPS1-203ENST00000397086 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
RNPS1-203ENST00000397086 FHAD1B1AJZ9 1412 aa26.96■■□□□ 1.91
RNPS1-203ENST00000397086 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
RNPS1-203ENST00000397086 RRBP1Q9P2E9 1410 aaKnown RBP26.94■■□□□ 1.9
RNPS1-203ENST00000397086 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
RNPS1-203ENST00000397086 CTTNBP2Q8WZ74 1663 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms