Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.7■■□□□ 1.54
RNF11Q9Y3C5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RNF11Q9Y3C5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF11Q9Y3C5 WHAMMP2-203ENST00000563942 1603 ntBASIC24.69■■□□□ 1.54
RNF11Q9Y3C5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF11Q9Y3C5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.69■■□□□ 1.54
RNF11Q9Y3C5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF11Q9Y3C5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RNF11Q9Y3C5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RNF11Q9Y3C5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF11Q9Y3C5 LINC00273-201ENST00000539813 1452 ntBASIC24.66■■□□□ 1.54
RNF11Q9Y3C5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF11Q9Y3C5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RNF11Q9Y3C5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 BX255925.1-201ENST00000566954 1854 ntBASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF11Q9Y3C5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF11Q9Y3C5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF11Q9Y3C5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF11Q9Y3C5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF11Q9Y3C5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF11Q9Y3C5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF11Q9Y3C5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RNF11Q9Y3C5 AC044849.2-201ENST00000606596 710 ntBASIC24.61■■□□□ 1.53
RNF11Q9Y3C5 AP002414.2-202ENST00000590929 1450 ntBASIC24.61■■□□□ 1.53
RNF11Q9Y3C5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF11Q9Y3C5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF11Q9Y3C5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RNF11Q9Y3C5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF11Q9Y3C5 LINC01003-201ENST00000564834 1764 ntBASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF11Q9Y3C5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF11Q9Y3C5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF11Q9Y3C5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RNF11Q9Y3C5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RNF11Q9Y3C5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RNF11Q9Y3C5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.57■■□□□ 1.52
RNF11Q9Y3C5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RNF11Q9Y3C5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF11Q9Y3C5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF11Q9Y3C5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.56■■□□□ 1.52
RNF11Q9Y3C5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF11Q9Y3C5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.55■■□□□ 1.52
RNF11Q9Y3C5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF11Q9Y3C5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF11Q9Y3C5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF11Q9Y3C5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.54■■□□□ 1.52
RNF11Q9Y3C5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RNF11Q9Y3C5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF11Q9Y3C5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF11Q9Y3C5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF11Q9Y3C5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF11Q9Y3C5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF11Q9Y3C5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF11Q9Y3C5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.49■■□□□ 1.51
RNF11Q9Y3C5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF11Q9Y3C5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF11Q9Y3C5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF11Q9Y3C5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF11Q9Y3C5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RNF11Q9Y3C5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
RNF11Q9Y3C5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
RNF11Q9Y3C5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF11Q9Y3C5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF11Q9Y3C5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF11Q9Y3C5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF11Q9Y3C5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF11Q9Y3C5 AC021231.2-201ENST00000594613 730 ntBASIC24.46■■□□□ 1.51
RNF11Q9Y3C5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF11Q9Y3C5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF11Q9Y3C5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms