Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC044849.2-201ENST00000606596 710 ntBASIC23.94■■□□□ 1.42
NEUROD4Q9HD90 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEUROD4Q9HD90 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEUROD4Q9HD90 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.93■■□□□ 1.42
NEUROD4Q9HD90 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.93■■□□□ 1.42
NEUROD4Q9HD90 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
NEUROD4Q9HD90 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NEUROD4Q9HD90 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NEUROD4Q9HD90 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.91■■□□□ 1.42
NEUROD4Q9HD90 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.91■■□□□ 1.42
NEUROD4Q9HD90 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.91■■□□□ 1.42
NEUROD4Q9HD90 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NEUROD4Q9HD90 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NEUROD4Q9HD90 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.89■■□□□ 1.41
NEUROD4Q9HD90 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
NEUROD4Q9HD90 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NEUROD4Q9HD90 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NEUROD4Q9HD90 MIR7108-201ENST00000614319 87 ntBASIC23.88■■□□□ 1.41
NEUROD4Q9HD90 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.87■■□□□ 1.41
NEUROD4Q9HD90 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.87■■□□□ 1.41
NEUROD4Q9HD90 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NEUROD4Q9HD90 AL121749.1-202ENST00000609313 2153 ntBASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 ABHD17AP4-201ENST00000411545 909 ntBASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.86■■□□□ 1.41
NEUROD4Q9HD90 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.85■■□□□ 1.41
NEUROD4Q9HD90 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEUROD4Q9HD90 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
NEUROD4Q9HD90 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEUROD4Q9HD90 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.84■■□□□ 1.41
NEUROD4Q9HD90 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEUROD4Q9HD90 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NEUROD4Q9HD90 AC018358.1-201ENST00000631079 1402 ntBASIC23.83■■□□□ 1.4
NEUROD4Q9HD90 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NEUROD4Q9HD90 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEUROD4Q9HD90 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NEUROD4Q9HD90 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEUROD4Q9HD90 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEUROD4Q9HD90 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.81■■□□□ 1.4
NEUROD4Q9HD90 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEUROD4Q9HD90 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.79■■□□□ 1.4
NEUROD4Q9HD90 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEUROD4Q9HD90 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEUROD4Q9HD90 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEUROD4Q9HD90 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NEUROD4Q9HD90 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
NEUROD4Q9HD90 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEUROD4Q9HD90 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEUROD4Q9HD90 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEUROD4Q9HD90 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.76■■□□□ 1.39
NEUROD4Q9HD90 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NEUROD4Q9HD90 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NEUROD4Q9HD90 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NEUROD4Q9HD90 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEUROD4Q9HD90 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEUROD4Q9HD90 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEUROD4Q9HD90 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEUROD4Q9HD90 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.72■■□□□ 1.39
NEUROD4Q9HD90 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEUROD4Q9HD90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEUROD4Q9HD90 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEUROD4Q9HD90 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NEUROD4Q9HD90 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.71■■□□□ 1.39
NEUROD4Q9HD90 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NEUROD4Q9HD90 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NEUROD4Q9HD90 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms