Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.52■□□□□ 0.56
MUC4Q99102 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.52■□□□□ 0.56
MUC4Q99102 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.52■□□□□ 0.55
MUC4Q99102 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MUC4Q99102 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MUC4Q99102 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MUC4Q99102 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MUC4Q99102 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MUC4Q99102 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MUC4Q99102 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.51■□□□□ 0.55
MUC4Q99102 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MUC4Q99102 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.5■□□□□ 0.55
MUC4Q99102 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.5■□□□□ 0.55
MUC4Q99102 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MUC4Q99102 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MUC4Q99102 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MUC4Q99102 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MUC4Q99102 AC044849.2-201ENST00000606596 710 ntBASIC18.49■□□□□ 0.55
MUC4Q99102 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MUC4Q99102 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.49■□□□□ 0.55
MUC4Q99102 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.49■□□□□ 0.55
MUC4Q99102 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.48■□□□□ 0.55
MUC4Q99102 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MUC4Q99102 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MUC4Q99102 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
MUC4Q99102 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MUC4Q99102 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MUC4Q99102 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.47■□□□□ 0.55
MUC4Q99102 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MUC4Q99102 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MUC4Q99102 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MUC4Q99102 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
MUC4Q99102 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MUC4Q99102 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MUC4Q99102 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MUC4Q99102 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MUC4Q99102 AC108673.1-201ENST00000510422 1159 ntBASIC18.44■□□□□ 0.54
MUC4Q99102 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MUC4Q99102 AC135983.2-203ENST00000454486 1613 ntBASIC18.44■□□□□ 0.54
MUC4Q99102 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MUC4Q99102 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MUC4Q99102 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.44■□□□□ 0.54
MUC4Q99102 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.44■□□□□ 0.54
MUC4Q99102 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.44■□□□□ 0.54
MUC4Q99102 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.44■□□□□ 0.54
MUC4Q99102 AP002414.2-202ENST00000590929 1450 ntBASIC18.43■□□□□ 0.54
MUC4Q99102 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.43■□□□□ 0.54
MUC4Q99102 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.43■□□□□ 0.54
MUC4Q99102 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.43■□□□□ 0.54
MUC4Q99102 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MUC4Q99102 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MUC4Q99102 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.42■□□□□ 0.54
MUC4Q99102 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MUC4Q99102 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MUC4Q99102 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MUC4Q99102 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MUC4Q99102 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MUC4Q99102 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MUC4Q99102 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.41■□□□□ 0.54
MUC4Q99102 AC087741.3-201ENST00000624270 1347 ntBASIC18.41■□□□□ 0.54
MUC4Q99102 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.41■□□□□ 0.54
MUC4Q99102 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MUC4Q99102 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MUC4Q99102 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MUC4Q99102 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
MUC4Q99102 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MUC4Q99102 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MUC4Q99102 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.4■□□□□ 0.54
MUC4Q99102 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.4■□□□□ 0.54
MUC4Q99102 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.4■□□□□ 0.54
MUC4Q99102 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.39■□□□□ 0.53
MUC4Q99102 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MUC4Q99102 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MUC4Q99102 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MUC4Q99102 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.38■□□□□ 0.53
MUC4Q99102 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MUC4Q99102 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MUC4Q99102 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.38■□□□□ 0.53
MUC4Q99102 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MUC4Q99102 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.37■□□□□ 0.53
MUC4Q99102 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MUC4Q99102 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.37■□□□□ 0.53
MUC4Q99102 WHAMMP2-203ENST00000563942 1603 ntBASIC18.37■□□□□ 0.53
MUC4Q99102 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MUC4Q99102 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MUC4Q99102 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MUC4Q99102 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MUC4Q99102 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MUC4Q99102 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.35■□□□□ 0.53
MUC4Q99102 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.34■□□□□ 0.53
MUC4Q99102 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 LINC00273-201ENST00000539813 1452 ntBASIC18.34■□□□□ 0.53
MUC4Q99102 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 AC018358.1-201ENST00000631079 1402 ntBASIC18.34■□□□□ 0.53
MUC4Q99102 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MUC4Q99102 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MUC4Q99102 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms