Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DKC1-204ENST00000426673 843 ntTSL 59.25□□□□□ -0.932e-7■■■■□ 26.5
SRSF1Q07955 DKC1-209ENST00000475966 902 ntTSL 59.16□□□□□ -0.942e-7■■■■□ 26.5
SRSF1Q07955 DKC1-202ENST00000412124 670 ntTSL 56.67□□□□□ -1.342e-7■■■■□ 26.5
SRSF1Q07955 ATP5I-203ENST00000506525 496 ntTSL 1 (best)12.61□□□□□ -0.393e-14■■■■□ 26.5
SRSF1Q07955 ATP5I-202ENST00000505852 300 ntTSL 29.56□□□□□ -0.883e-14■■■■□ 26.5
SRSF1Q07955 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.923e-14■■■■□ 26.5
SRSF1Q07955 ATP5I-205ENST00000515202 393 ntTSL 28.2□□□□□ -1.13e-14■■■■□ 26.5
SRSF1Q07955 ATP5I-204ENST00000515116 247 ntTSL 25.33□□□□□ -1.563e-14■■■■□ 26.5
SRSF1Q07955 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.072e-7■■■■□ 26.5
SRSF1Q07955 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.631e-6■■■■□ 26.5
SRSF1Q07955 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.035e-9■■■■□ 26.4
SRSF1Q07955 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)12.52□□□□□ -0.415e-9■■■■□ 26.4
SRSF1Q07955 PRSS53-202ENST00000486499 5489 ntTSL 212.27□□□□□ -0.445e-9■■■■□ 26.4
SRSF1Q07955 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.18□□□□□ -0.141e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.76□□□□□ -0.371e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.441e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.32□□□□□ -0.441e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.21□□□□□ -0.461e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.21□□□□□ -0.461e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.471e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■■□ 26.4
SRSF1Q07955 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.57□□□□□ -0.561e-6■■■■□ 26.4
SRSF1Q07955 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.93■■□□□ 1.423e-6■■■■□ 26.4
SRSF1Q07955 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.22□□□□□ -1.413e-6■■■■□ 26.4
SRSF1Q07955 CRNDE-207ENST00000559598 696 ntTSL 1 (best)6.22□□□□□ -1.413e-6■■■■□ 26.4
SRSF1Q07955 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.93□□□□□ -1.623e-6■■■■□ 26.4
SRSF1Q07955 CRNDE-204ENST00000558031 464 ntTSL 24.12□□□□□ -1.753e-6■■■■□ 26.4
SRSF1Q07955 PTMA-206ENST00000412128 863 ntTSL 323.42■■□□□ 1.343e-27■■■■□ 26.4
SRSF1Q07955 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.82■□□□□ 0.923e-27■■■■□ 26.4
SRSF1Q07955 PTMA-208ENST00000448874 1108 ntTSL 216.15■□□□□ 0.183e-27■■■■□ 26.4
SRSF1Q07955 PTMA-212ENST00000481928 1635 ntTSL 314.53□□□□□ -0.083e-27■■■■□ 26.4
SRSF1Q07955 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.743e-27■■■■□ 26.4
SRSF1Q07955 PTMA-209ENST00000466801 784 ntTSL 510.19□□□□□ -0.783e-27■■■■□ 26.4
SRSF1Q07955 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.873e-27■■■■□ 26.4
SRSF1Q07955 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.26□□□□□ -0.933e-27■■■■□ 26.4
SRSF1Q07955 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC9.23□□□□□ -0.933e-27■■■■□ 26.4
SRSF1Q07955 GPS2-208ENST00000572172 1534 ntTSL 521.73■■□□□ 1.071e-8■■■■□ 26.4
SRSF1Q07955 NUDC-202ENST00000435827 821 ntTSL 521.39■■□□□ 1.011e-8■■■■□ 26.4
SRSF1Q07955 NUDC-203ENST00000452707 816 ntTSL 321.23■□□□□ 0.991e-8■■■■□ 26.4
SRSF1Q07955 ENGASE-204ENST00000578419 1381 ntTSL 220.47■□□□□ 0.871e-8■■■■□ 26.4
SRSF1Q07955 GPS2-205ENST00000571569 1586 ntTSL 1 (best)20.18■□□□□ 0.821e-8■■■■□ 26.4
SRSF1Q07955 GPS2-204ENST00000571098 1045 ntTSL 219.6■□□□□ 0.731e-8■■■■□ 26.4
SRSF1Q07955 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.711e-8■■■■□ 26.4
SRSF1Q07955 ENGASE-202ENST00000311595 1381 ntTSL 519.18■□□□□ 0.661e-8■■■■□ 26.4
SRSF1Q07955 SKA3-205ENST00000465471 930 ntTSL 518.53■□□□□ 0.561e-8■■■■□ 26.4
SRSF1Q07955 ENGASE-208ENST00000583646 471 ntTSL 218.31■□□□□ 0.521e-8■■■■□ 26.4
SRSF1Q07955 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.14■□□□□ 0.331e-8■■■■□ 26.4
SRSF1Q07955 MRPL53-203ENST00000467349 451 ntTSL 216.63■□□□□ 0.251e-8■■■■□ 26.4
SRSF1Q07955 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-8■■■■□ 26.4
SRSF1Q07955 GPS2-211ENST00000573059 829 ntTSL 316.5■□□□□ 0.231e-8■■■■□ 26.4
SRSF1Q07955 TERT-205ENST00000503656 406 ntTSL 316.13■□□□□ 0.171e-8■■■■□ 26.4
SRSF1Q07955 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.051e-8■■■■□ 26.4
SRSF1Q07955 GPS2-207ENST00000571697 1977 ntTSL 215.3■□□□□ 0.041e-8■■■■□ 26.4
SRSF1Q07955 GPS2-209ENST00000572363 1143 ntTSL 515.22■□□□□ 0.031e-8■■■■□ 26.4
SRSF1Q07955 GPS2-214ENST00000574201 550 ntTSL 215.13■□□□□ 0.011e-8■■■■□ 26.4
SRSF1Q07955 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 01e-8■■■■□ 26.4
SRSF1Q07955 SKA3-204ENST00000462482 750 ntTSL 215.04■□□□□ -01e-8■■■■□ 26.4
SRSF1Q07955 MRPL53-204ENST00000468875 574 ntTSL 214.4□□□□□ -0.11e-8■■■■□ 26.4
SRSF1Q07955 TERT-203ENST00000460137 2992 ntTSL 1 (best)14.21□□□□□ -0.141e-8■■■■□ 26.4
SRSF1Q07955 PPAT-205ENST00000510643 808 ntTSL 514.13□□□□□ -0.151e-8■■■■□ 26.4
SRSF1Q07955 AC026954.2-201ENST00000315601 2349 ntAPPRIS ALT2 TSL 214.04□□□□□ -0.161e-8■■■■□ 26.4
SRSF1Q07955 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.271e-8■■■■□ 26.4
SRSF1Q07955 TERT-204ENST00000484238 2422 ntTSL 513.36□□□□□ -0.271e-8■■■■□ 26.4
SRSF1Q07955 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.341e-8■■■■□ 26.4
SRSF1Q07955 GPS2-210ENST00000572707 878 ntTSL 312.88□□□□□ -0.351e-8■■■■□ 26.4
SRSF1Q07955 GPS2-216ENST00000577040 916 ntTSL 512.82□□□□□ -0.361e-8■■■■□ 26.4
SRSF1Q07955 SKA3-206ENST00000475251 397 ntTSL 212.76□□□□□ -0.371e-8■■■■□ 26.4
SRSF1Q07955 GPS2-203ENST00000570780 1238 ntTSL 512.14□□□□□ -0.471e-8■■■■□ 26.4
SRSF1Q07955 PPAT-204ENST00000507724 563 ntTSL 312.1□□□□□ -0.471e-8■■■■□ 26.4
SRSF1Q07955 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.521e-8■■■■□ 26.4
SRSF1Q07955 ENGASE-201ENST00000300682 4626 ntTSL 511.12□□□□□ -0.631e-8■■■■□ 26.4
SRSF1Q07955 SKA3-201ENST00000298260 2803 ntTSL 210.46□□□□□ -0.741e-8■■■■□ 26.4
SRSF1Q07955 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.761e-8■■■■□ 26.4
SRSF1Q07955 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.811e-8■■■■□ 26.4
SRSF1Q07955 GPS2-202ENST00000389167 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.831e-8■■■■□ 26.4
SRSF1Q07955 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.941e-8■■■■□ 26.4
SRSF1Q07955 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.021e-8■■■■□ 26.4
SRSF1Q07955 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.031e-8■■■■□ 26.4
SRSF1Q07955 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.111e-8■■■■□ 26.4
SRSF1Q07955 GPS2-206ENST00000571695 563 ntTSL 25.02□□□□□ -1.611e-8■■■■□ 26.4
SRSF1Q07955 APLP2-223ENST00000534001 585 ntTSL 420.38■□□□□ 0.853e-19■■■■□ 26.3
SRSF1Q07955 AP4B1-205ENST00000369571 980 ntTSL 319.66■□□□□ 0.742e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-212ENST00000484201 981 ntTSL 516.37■□□□□ 0.212e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-202ENST00000369564 1225 ntTSL 516.37■□□□□ 0.212e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-206ENST00000432415 681 ntTSL 314.39□□□□□ -0.112e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.472e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-214ENST00000489499 1044 ntTSL 211.74□□□□□ -0.532e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.672e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-203ENST00000369567 2144 ntTSL 2 BASIC9.28□□□□□ -0.922e-7■■■■□ 26.3
SRSF1Q07955 AP4B1-213ENST00000489092 955 ntTSL 38.78□□□□□ -12e-7■■■■□ 26.3
SRSF1Q07955 DDX17-207ENST00000475004 443 ntTSL 39.17□□□□□ -0.949e-12■■■■□ 26.3
SRSF1Q07955 HPS1-214ENST00000498219 845 ntTSL 513.66□□□□□ -0.222e-6■■■■□ 26.2
SRSF1Q07955 HPS1-203ENST00000359632 978 ntTSL 313.61□□□□□ -0.232e-6■■■■□ 26.2
SRSF1Q07955 HPS1-211ENST00000478087 971 ntTSL 512.45□□□□□ -0.422e-6■■■■□ 26.2
SRSF1Q07955 HPS1-209ENST00000470095 801 ntTSL 512.22□□□□□ -0.452e-6■■■■□ 26.2
SRSF1Q07955 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.72e-6■■■■□ 26.2
SRSF1Q07955 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.792e-6■■■■□ 26.2
SRSF1Q07955 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.942e-6■■■■□ 26.2
SRSF1Q07955 HPS1-208ENST00000467246 2791 ntTSL 1 (best)8.8□□□□□ -12e-6■■■■□ 26.2
SRSF1Q07955 NFRKB-204ENST00000526884 568 ntTSL 322.14■■□□□ 1.139e-10■■■■□ 26.2
Retrieved 100 of 14,836 protein–RNA pairs in 428.5 ms