RNA–Protein interactions for RNA: ENST00000475966.1

DKC1-209, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-209ENST00000475966 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
DKC1-209ENST00000475966 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
DKC1-209ENST00000475966 ABCC9O60706 1549 aa21.02■□□□□ 0.96
DKC1-209ENST00000475966 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
DKC1-209ENST00000475966 NACADO15069 1562 aa19.94■□□□□ 0.78
DKC1-209ENST00000475966 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
DKC1-209ENST00000475966 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
DKC1-209ENST00000475966 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
DKC1-209ENST00000475966 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
DKC1-209ENST00000475966 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
DKC1-209ENST00000475966 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
DKC1-209ENST00000475966 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
DKC1-209ENST00000475966 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
DKC1-209ENST00000475966 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
DKC1-209ENST00000475966 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
DKC1-209ENST00000475966 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
DKC1-209ENST00000475966 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
DKC1-209ENST00000475966 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
DKC1-209ENST00000475966 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
DKC1-209ENST00000475966 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
DKC1-209ENST00000475966 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
DKC1-209ENST00000475966 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
DKC1-209ENST00000475966 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
DKC1-209ENST00000475966 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
DKC1-209ENST00000475966 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
DKC1-209ENST00000475966 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
DKC1-209ENST00000475966 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.49
DKC1-209ENST00000475966 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
DKC1-209ENST00000475966 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
DKC1-209ENST00000475966 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
DKC1-209ENST00000475966 CUX2O14529 1486 aa18.11■□□□□ 0.49
DKC1-209ENST00000475966 NESP48681 1621 aa18.09■□□□□ 0.49
DKC1-209ENST00000475966 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.47
DKC1-209ENST00000475966 WIZO95785 1651 aa17.91■□□□□ 0.46
DKC1-209ENST00000475966 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
DKC1-209ENST00000475966 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
DKC1-209ENST00000475966 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
DKC1-209ENST00000475966 KIF21AQ7Z4S6 1674 aa17.85■□□□□ 0.45
DKC1-209ENST00000475966 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
DKC1-209ENST00000475966 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
DKC1-209ENST00000475966 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
DKC1-209ENST00000475966 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
DKC1-209ENST00000475966 CFTRP13569 1480 aa17.66■□□□□ 0.42
DKC1-209ENST00000475966 WDR62O43379 1518 aa17.66■□□□□ 0.42
DKC1-209ENST00000475966 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
DKC1-209ENST00000475966 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
DKC1-209ENST00000475966 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
DKC1-209ENST00000475966 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
DKC1-209ENST00000475966 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
DKC1-209ENST00000475966 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
DKC1-209ENST00000475966 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
DKC1-209ENST00000475966 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
DKC1-209ENST00000475966 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
DKC1-209ENST00000475966 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
DKC1-209ENST00000475966 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
DKC1-209ENST00000475966 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
DKC1-209ENST00000475966 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
DKC1-209ENST00000475966 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
DKC1-209ENST00000475966 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
DKC1-209ENST00000475966 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
DKC1-209ENST00000475966 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.332e-18■■■■■ 37.1
DKC1-209ENST00000475966 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
DKC1-209ENST00000475966 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
DKC1-209ENST00000475966 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
DKC1-209ENST00000475966 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
DKC1-209ENST00000475966 SOGA1O94964 1423 aa17.06■□□□□ 0.32
DKC1-209ENST00000475966 CUX1P39880 1505 aa17.03■□□□□ 0.32
DKC1-209ENST00000475966 CHD1O14646 1710 aa17.03■□□□□ 0.32
DKC1-209ENST00000475966 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
DKC1-209ENST00000475966 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
DKC1-209ENST00000475966 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
DKC1-209ENST00000475966 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
DKC1-209ENST00000475966 FBLN2P98095 1184 aa16.96■□□□□ 0.31
DKC1-209ENST00000475966 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
DKC1-209ENST00000475966 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
DKC1-209ENST00000475966 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
DKC1-209ENST00000475966 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
DKC1-209ENST00000475966 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
DKC1-209ENST00000475966 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
DKC1-209ENST00000475966 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
DKC1-209ENST00000475966 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
DKC1-209ENST00000475966 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
DKC1-209ENST00000475966 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
DKC1-209ENST00000475966 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
DKC1-209ENST00000475966 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
DKC1-209ENST00000475966 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
DKC1-209ENST00000475966 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
DKC1-209ENST00000475966 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
DKC1-209ENST00000475966 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
DKC1-209ENST00000475966 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
DKC1-209ENST00000475966 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
DKC1-209ENST00000475966 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
DKC1-209ENST00000475966 NUP160Q12769 1436 aa16.64■□□□□ 0.25
DKC1-209ENST00000475966 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
DKC1-209ENST00000475966 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
DKC1-209ENST00000475966 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
DKC1-209ENST00000475966 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
DKC1-209ENST00000475966 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
DKC1-209ENST00000475966 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
DKC1-209ENST00000475966 JPH4Q96JJ6 628 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms