RNA–Protein interactions for RNA: ENST00000489499.5

AP4B1-214, Transcript of adaptor related protein complex 4 subunit beta 1, humanhuman

TSL 2

Gene AP4B1, Length 1,044 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1-214ENST00000489499 NISCHQ9Y2I1 1504 aa29.11■■■□□ 2.25
AP4B1-214ENST00000489499 ABCC9O60706 1549 aa26.62■■□□□ 1.85
AP4B1-214ENST00000489499 CCDC180Q9P1Z9 1646 aa26.2■■□□□ 1.78
AP4B1-214ENST00000489499 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
AP4B1-214ENST00000489499 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
AP4B1-214ENST00000489499 NACADO15069 1562 aa24.9■■□□□ 1.58
AP4B1-214ENST00000489499 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
AP4B1-214ENST00000489499 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
AP4B1-214ENST00000489499 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
AP4B1-214ENST00000489499 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
AP4B1-214ENST00000489499 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
AP4B1-214ENST00000489499 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
AP4B1-214ENST00000489499 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
AP4B1-214ENST00000489499 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
AP4B1-214ENST00000489499 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
AP4B1-214ENST00000489499 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
AP4B1-214ENST00000489499 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
AP4B1-214ENST00000489499 EIF4G1Q04637 1599 aaKnown RBP23.85■■□□□ 1.41
AP4B1-214ENST00000489499 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
AP4B1-214ENST00000489499 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
AP4B1-214ENST00000489499 CUX2O14529 1486 aa23.05■■□□□ 1.28
AP4B1-214ENST00000489499 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
AP4B1-214ENST00000489499 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
AP4B1-214ENST00000489499 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
AP4B1-214ENST00000489499 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
AP4B1-214ENST00000489499 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
AP4B1-214ENST00000489499 NESP48681 1621 aa22.74■■□□□ 1.23
AP4B1-214ENST00000489499 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
AP4B1-214ENST00000489499 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
AP4B1-214ENST00000489499 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
AP4B1-214ENST00000489499 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
AP4B1-214ENST00000489499 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
AP4B1-214ENST00000489499 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
AP4B1-214ENST00000489499 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
AP4B1-214ENST00000489499 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
AP4B1-214ENST00000489499 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
AP4B1-214ENST00000489499 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
AP4B1-214ENST00000489499 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
AP4B1-214ENST00000489499 WDR62O43379 1518 aa22.18■■□□□ 1.14
AP4B1-214ENST00000489499 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
AP4B1-214ENST00000489499 WIZO95785 1651 aa22.11■■□□□ 1.13
AP4B1-214ENST00000489499 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
AP4B1-214ENST00000489499 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
AP4B1-214ENST00000489499 CFTRP13569 1480 aa21.97■■□□□ 1.11
AP4B1-214ENST00000489499 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
AP4B1-214ENST00000489499 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
AP4B1-214ENST00000489499 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
AP4B1-214ENST00000489499 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
AP4B1-214ENST00000489499 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
AP4B1-214ENST00000489499 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
AP4B1-214ENST00000489499 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
AP4B1-214ENST00000489499 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
AP4B1-214ENST00000489499 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
AP4B1-214ENST00000489499 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
AP4B1-214ENST00000489499 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
AP4B1-214ENST00000489499 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
AP4B1-214ENST00000489499 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
AP4B1-214ENST00000489499 CYB5RLQ6IPT4 315 aa21.53■■□□□ 1.04
AP4B1-214ENST00000489499 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
AP4B1-214ENST00000489499 FBLN2P98095 1184 aa21.49■■□□□ 1.03
AP4B1-214ENST00000489499 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
AP4B1-214ENST00000489499 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
AP4B1-214ENST00000489499 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
AP4B1-214ENST00000489499 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
AP4B1-214ENST00000489499 CHD1O14646 1710 aa21.36■■□□□ 1.01
AP4B1-214ENST00000489499 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
AP4B1-214ENST00000489499 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
AP4B1-214ENST00000489499 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
AP4B1-214ENST00000489499 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
AP4B1-214ENST00000489499 SOGA1O94964 1423 aa21.29■■□□□ 1
AP4B1-214ENST00000489499 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
AP4B1-214ENST00000489499 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
AP4B1-214ENST00000489499 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
AP4B1-214ENST00000489499 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
AP4B1-214ENST00000489499 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
AP4B1-214ENST00000489499 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
AP4B1-214ENST00000489499 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
AP4B1-214ENST00000489499 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
AP4B1-214ENST00000489499 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
AP4B1-214ENST00000489499 CUX1P39880 1505 aa21.09■□□□□ 0.97
AP4B1-214ENST00000489499 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
AP4B1-214ENST00000489499 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
AP4B1-214ENST00000489499 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
AP4B1-214ENST00000489499 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
AP4B1-214ENST00000489499 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
AP4B1-214ENST00000489499 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
AP4B1-214ENST00000489499 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
AP4B1-214ENST00000489499 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
AP4B1-214ENST00000489499 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
AP4B1-214ENST00000489499 NUP160Q12769 1436 aa20.77■□□□□ 0.91
AP4B1-214ENST00000489499 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
AP4B1-214ENST00000489499 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
AP4B1-214ENST00000489499 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
AP4B1-214ENST00000489499 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
AP4B1-214ENST00000489499 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
AP4B1-214ENST00000489499 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
AP4B1-214ENST00000489499 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
AP4B1-214ENST00000489499 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
AP4B1-214ENST00000489499 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
AP4B1-214ENST00000489499 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms