RNA–Protein interactions for RNA: ENST00000467349.1

MRPL53-203, Transcript of mitochondrial ribosomal protein L53, humanhuman

TSL 2

Gene MRPL53, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53-203ENST00000467349 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
MRPL53-203ENST00000467349 ABCC9O60706 1549 aa37.39■■■■□ 3.58
MRPL53-203ENST00000467349 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
MRPL53-203ENST00000467349 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
MRPL53-203ENST00000467349 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
MRPL53-203ENST00000467349 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
MRPL53-203ENST00000467349 NACADO15069 1562 aa34.52■■■■□ 3.12
MRPL53-203ENST00000467349 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
MRPL53-203ENST00000467349 DCAF8L2P0C7V8 631 aa34.2■■■■□ 3.07
MRPL53-203ENST00000467349 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
MRPL53-203ENST00000467349 DNAJC5Q9H3Z4 198 aa33.8■■■■□ 3
MRPL53-203ENST00000467349 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
MRPL53-203ENST00000467349 CC2D2AQ9P2K1 1620 aa33.71■■■□□ 2.99
MRPL53-203ENST00000467349 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
MRPL53-203ENST00000467349 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
MRPL53-203ENST00000467349 EIF4G1Q04637 1599 aaKnown RBP33.35■■■□□ 2.93
MRPL53-203ENST00000467349 SCRIBQ14160 1630 aa33.07■■■□□ 2.88
MRPL53-203ENST00000467349 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
MRPL53-203ENST00000467349 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.84
MRPL53-203ENST00000467349 CUX2O14529 1486 aa32.59■■■□□ 2.81
MRPL53-203ENST00000467349 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
MRPL53-203ENST00000467349 TRIM41Q8WV44 630 aa31.97■■■□□ 2.71
MRPL53-203ENST00000467349 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
MRPL53-203ENST00000467349 NESP48681 1621 aa31.83■■■□□ 2.69
MRPL53-203ENST00000467349 THOC2Q8NI27 1593 aaKnown RBP31.71■■■□□ 2.67
MRPL53-203ENST00000467349 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
MRPL53-203ENST00000467349 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
MRPL53-203ENST00000467349 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
MRPL53-203ENST00000467349 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
MRPL53-203ENST00000467349 SMARCA4P51532 1647 aa31.39■■■□□ 2.62
MRPL53-203ENST00000467349 LAMC3Q9Y6N6 1575 aa31.35■■■□□ 2.61
MRPL53-203ENST00000467349 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
MRPL53-203ENST00000467349 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
MRPL53-203ENST00000467349 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
MRPL53-203ENST00000467349 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
MRPL53-203ENST00000467349 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
MRPL53-203ENST00000467349 WDR62O43379 1518 aa30.98■■■□□ 2.55
MRPL53-203ENST00000467349 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
MRPL53-203ENST00000467349 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
MRPL53-203ENST00000467349 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
MRPL53-203ENST00000467349 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
MRPL53-203ENST00000467349 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
MRPL53-203ENST00000467349 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
MRPL53-203ENST00000467349 CEP164Q9UPV0 1460 aa30.69■■■□□ 2.5
MRPL53-203ENST00000467349 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
MRPL53-203ENST00000467349 ARHGEF11O15085 1522 aa30.48■■■□□ 2.47
MRPL53-203ENST00000467349 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
MRPL53-203ENST00000467349 WIZO95785 1651 aa30.39■■■□□ 2.45
MRPL53-203ENST00000467349 TRHP20396 242 aaPredicted RBP30.35■■■□□ 2.45
MRPL53-203ENST00000467349 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
MRPL53-203ENST00000467349 CFTRP13569 1480 aa30.28■■■□□ 2.44
MRPL53-203ENST00000467349 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
MRPL53-203ENST00000467349 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
MRPL53-203ENST00000467349 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
MRPL53-203ENST00000467349 IFT140Q96RY7 1462 aa30.08■■■□□ 2.41
MRPL53-203ENST00000467349 CHD1O14646 1710 aa30.03■■■□□ 2.4
MRPL53-203ENST00000467349 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
MRPL53-203ENST00000467349 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
MRPL53-203ENST00000467349 RSF1Q96T23 1441 aaPredicted RBP29.87■■■□□ 2.37
MRPL53-203ENST00000467349 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
MRPL53-203ENST00000467349 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
MRPL53-203ENST00000467349 FBLN2P98095 1184 aa29.81■■■□□ 2.36
MRPL53-203ENST00000467349 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.36
MRPL53-203ENST00000467349 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
MRPL53-203ENST00000467349 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
MRPL53-203ENST00000467349 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
MRPL53-203ENST00000467349 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
MRPL53-203ENST00000467349 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
MRPL53-203ENST00000467349 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
MRPL53-203ENST00000467349 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
MRPL53-203ENST00000467349 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
MRPL53-203ENST00000467349 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
MRPL53-203ENST00000467349 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
MRPL53-203ENST00000467349 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
MRPL53-203ENST00000467349 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
MRPL53-203ENST00000467349 SOGA1O94964 1423 aa29.3■■■□□ 2.28
MRPL53-203ENST00000467349 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
MRPL53-203ENST00000467349 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
MRPL53-203ENST00000467349 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
MRPL53-203ENST00000467349 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
MRPL53-203ENST00000467349 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
MRPL53-203ENST00000467349 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
MRPL53-203ENST00000467349 ILDR1Q86SU0 546 aaPredicted RBP29.1■■■□□ 2.25
MRPL53-203ENST00000467349 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
MRPL53-203ENST00000467349 KIF13AQ9H1H9 1805 aa29.07■■■□□ 2.24
MRPL53-203ENST00000467349 CUX1P39880 1505 aa28.97■■■□□ 2.23
MRPL53-203ENST00000467349 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
MRPL53-203ENST00000467349 KDM4FA0A1W2PPD8 638 aa28.84■■■□□ 2.21
MRPL53-203ENST00000467349 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
MRPL53-203ENST00000467349 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
MRPL53-203ENST00000467349 SHROOM2Q13796 1616 aa28.76■■■□□ 2.2
MRPL53-203ENST00000467349 NUP160Q12769 1436 aa28.74■■■□□ 2.19
MRPL53-203ENST00000467349 FAM69CQ0P6D2 419 aa28.72■■■□□ 2.19
MRPL53-203ENST00000467349 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
MRPL53-203ENST00000467349 ADAMTS12P58397 1594 aa28.7■■■□□ 2.18
MRPL53-203ENST00000467349 ABCC10Q5T3U5 1492 aa28.67■■■□□ 2.18
MRPL53-203ENST00000467349 KDM6BO15054 1643 aa28.67■■■□□ 2.18
MRPL53-203ENST00000467349 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
MRPL53-203ENST00000467349 TSPOAP1O95153 1857 aa28.59■■■□□ 2.17
MRPL53-203ENST00000467349 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms