RNA–Protein interactions for RNA: ENST00000412124.5

DKC1-202, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-202ENST00000412124 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
DKC1-202ENST00000412124 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
DKC1-202ENST00000412124 ABCC9O60706 1549 aa15.37■□□□□ 0.05
DKC1-202ENST00000412124 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
DKC1-202ENST00000412124 NACADO15069 1562 aa14.74□□□□□ -0.05
DKC1-202ENST00000412124 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
DKC1-202ENST00000412124 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
DKC1-202ENST00000412124 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
DKC1-202ENST00000412124 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
DKC1-202ENST00000412124 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
DKC1-202ENST00000412124 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
DKC1-202ENST00000412124 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
DKC1-202ENST00000412124 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
DKC1-202ENST00000412124 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
DKC1-202ENST00000412124 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
DKC1-202ENST00000412124 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
DKC1-202ENST00000412124 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
DKC1-202ENST00000412124 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
DKC1-202ENST00000412124 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
DKC1-202ENST00000412124 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
DKC1-202ENST00000412124 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
DKC1-202ENST00000412124 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
DKC1-202ENST00000412124 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
DKC1-202ENST00000412124 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
DKC1-202ENST00000412124 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
DKC1-202ENST00000412124 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
DKC1-202ENST00000412124 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
DKC1-202ENST00000412124 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
DKC1-202ENST00000412124 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
DKC1-202ENST00000412124 WIZO95785 1651 aa13.37□□□□□ -0.27
DKC1-202ENST00000412124 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
DKC1-202ENST00000412124 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
DKC1-202ENST00000412124 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
DKC1-202ENST00000412124 NESP48681 1621 aa13.27□□□□□ -0.29
DKC1-202ENST00000412124 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
DKC1-202ENST00000412124 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
DKC1-202ENST00000412124 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
DKC1-202ENST00000412124 CUX2O14529 1486 aa13.16□□□□□ -0.3
DKC1-202ENST00000412124 CFTRP13569 1480 aa13.11□□□□□ -0.31
DKC1-202ENST00000412124 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
DKC1-202ENST00000412124 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
DKC1-202ENST00000412124 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
DKC1-202ENST00000412124 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
DKC1-202ENST00000412124 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
DKC1-202ENST00000412124 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
DKC1-202ENST00000412124 WDR62O43379 1518 aa13□□□□□ -0.33
DKC1-202ENST00000412124 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
DKC1-202ENST00000412124 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
DKC1-202ENST00000412124 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
DKC1-202ENST00000412124 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
DKC1-202ENST00000412124 TOPBP1Q92547 1522 aa12.83□□□□□ -0.35
DKC1-202ENST00000412124 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
DKC1-202ENST00000412124 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
DKC1-202ENST00000412124 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
DKC1-202ENST00000412124 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
DKC1-202ENST00000412124 CUX1P39880 1505 aa12.71□□□□□ -0.38
DKC1-202ENST00000412124 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
DKC1-202ENST00000412124 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
DKC1-202ENST00000412124 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
DKC1-202ENST00000412124 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
DKC1-202ENST00000412124 SOGA1O94964 1423 aa12.66□□□□□ -0.38
DKC1-202ENST00000412124 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
DKC1-202ENST00000412124 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
DKC1-202ENST00000412124 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
DKC1-202ENST00000412124 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.392e-14■■■■■ 37.1
DKC1-202ENST00000412124 TOP2BQ02880 1626 aa12.6□□□□□ -0.39
DKC1-202ENST00000412124 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
DKC1-202ENST00000412124 TDRD9Q8NDG6 1382 aaKnown RBP12.59□□□□□ -0.39
DKC1-202ENST00000412124 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
DKC1-202ENST00000412124 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
DKC1-202ENST00000412124 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
DKC1-202ENST00000412124 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
DKC1-202ENST00000412124 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
DKC1-202ENST00000412124 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
DKC1-202ENST00000412124 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
DKC1-202ENST00000412124 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
DKC1-202ENST00000412124 CHD1O14646 1710 aa12.49□□□□□ -0.41
DKC1-202ENST00000412124 PBRM1Q86U86 1689 aa12.49□□□□□ -0.41
DKC1-202ENST00000412124 FBLN2P98095 1184 aa12.49□□□□□ -0.41
DKC1-202ENST00000412124 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
DKC1-202ENST00000412124 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
DKC1-202ENST00000412124 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
DKC1-202ENST00000412124 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
DKC1-202ENST00000412124 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
DKC1-202ENST00000412124 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
DKC1-202ENST00000412124 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
DKC1-202ENST00000412124 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
DKC1-202ENST00000412124 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
DKC1-202ENST00000412124 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
DKC1-202ENST00000412124 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
DKC1-202ENST00000412124 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
DKC1-202ENST00000412124 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
DKC1-202ENST00000412124 NUP160Q12769 1436 aa12.32□□□□□ -0.44
DKC1-202ENST00000412124 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
DKC1-202ENST00000412124 CUL7Q14999 1698 aa12.3□□□□□ -0.44
DKC1-202ENST00000412124 IGF1RP08069 1367 aa12.3□□□□□ -0.44
DKC1-202ENST00000412124 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
DKC1-202ENST00000412124 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
DKC1-202ENST00000412124 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
DKC1-202ENST00000412124 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms