RNA–Protein interactions for RNA: ENST00000426673.5

DKC1-204, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-204ENST00000426673 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
DKC1-204ENST00000426673 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
DKC1-204ENST00000426673 ABCC9O60706 1549 aa21.12■□□□□ 0.97
DKC1-204ENST00000426673 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
DKC1-204ENST00000426673 NACADO15069 1562 aa20.1■□□□□ 0.81
DKC1-204ENST00000426673 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
DKC1-204ENST00000426673 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
DKC1-204ENST00000426673 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
DKC1-204ENST00000426673 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
DKC1-204ENST00000426673 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
DKC1-204ENST00000426673 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
DKC1-204ENST00000426673 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
DKC1-204ENST00000426673 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
DKC1-204ENST00000426673 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
DKC1-204ENST00000426673 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
DKC1-204ENST00000426673 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
DKC1-204ENST00000426673 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
DKC1-204ENST00000426673 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
DKC1-204ENST00000426673 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
DKC1-204ENST00000426673 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
DKC1-204ENST00000426673 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
DKC1-204ENST00000426673 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
DKC1-204ENST00000426673 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
DKC1-204ENST00000426673 HMGXB3Q12766 1538 aa18.39■□□□□ 0.54
DKC1-204ENST00000426673 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
DKC1-204ENST00000426673 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
DKC1-204ENST00000426673 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
DKC1-204ENST00000426673 CUX2O14529 1486 aa18.26■□□□□ 0.51
DKC1-204ENST00000426673 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
DKC1-204ENST00000426673 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
DKC1-204ENST00000426673 NESP48681 1621 aa18.12■□□□□ 0.49
DKC1-204ENST00000426673 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
DKC1-204ENST00000426673 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
DKC1-204ENST00000426673 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
DKC1-204ENST00000426673 WIZO95785 1651 aa17.98■□□□□ 0.47
DKC1-204ENST00000426673 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
DKC1-204ENST00000426673 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
DKC1-204ENST00000426673 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
DKC1-204ENST00000426673 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
DKC1-204ENST00000426673 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
DKC1-204ENST00000426673 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
DKC1-204ENST00000426673 CFTRP13569 1480 aa17.78■□□□□ 0.44
DKC1-204ENST00000426673 WDR62O43379 1518 aa17.76■□□□□ 0.43
DKC1-204ENST00000426673 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
DKC1-204ENST00000426673 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
DKC1-204ENST00000426673 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
DKC1-204ENST00000426673 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
DKC1-204ENST00000426673 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
DKC1-204ENST00000426673 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
DKC1-204ENST00000426673 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
DKC1-204ENST00000426673 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
DKC1-204ENST00000426673 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
DKC1-204ENST00000426673 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
DKC1-204ENST00000426673 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
DKC1-204ENST00000426673 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
DKC1-204ENST00000426673 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
DKC1-204ENST00000426673 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
DKC1-204ENST00000426673 SOGA1O94964 1423 aa17.21■□□□□ 0.35
DKC1-204ENST00000426673 AQRO60306 1485 aaKnown RBP eCLIP17.2■□□□□ 0.342e-18■■■■■ 37.1
DKC1-204ENST00000426673 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
DKC1-204ENST00000426673 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
DKC1-204ENST00000426673 FBLN2P98095 1184 aa17.15■□□□□ 0.34
DKC1-204ENST00000426673 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
DKC1-204ENST00000426673 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
DKC1-204ENST00000426673 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
DKC1-204ENST00000426673 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
DKC1-204ENST00000426673 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
DKC1-204ENST00000426673 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
DKC1-204ENST00000426673 CUX1P39880 1505 aa17.1■□□□□ 0.33
DKC1-204ENST00000426673 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
DKC1-204ENST00000426673 CHD1O14646 1710 aa17.08■□□□□ 0.32
DKC1-204ENST00000426673 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
DKC1-204ENST00000426673 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
DKC1-204ENST00000426673 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
DKC1-204ENST00000426673 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
DKC1-204ENST00000426673 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
DKC1-204ENST00000426673 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
DKC1-204ENST00000426673 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
DKC1-204ENST00000426673 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
DKC1-204ENST00000426673 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
DKC1-204ENST00000426673 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
DKC1-204ENST00000426673 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
DKC1-204ENST00000426673 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
DKC1-204ENST00000426673 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
DKC1-204ENST00000426673 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
DKC1-204ENST00000426673 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
DKC1-204ENST00000426673 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
DKC1-204ENST00000426673 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
DKC1-204ENST00000426673 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
DKC1-204ENST00000426673 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
DKC1-204ENST00000426673 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
DKC1-204ENST00000426673 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
DKC1-204ENST00000426673 NUP160Q12769 1436 aa16.74■□□□□ 0.27
DKC1-204ENST00000426673 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
DKC1-204ENST00000426673 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
DKC1-204ENST00000426673 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
DKC1-204ENST00000426673 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
DKC1-204ENST00000426673 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
DKC1-204ENST00000426673 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
DKC1-204ENST00000426673 IGF1RP08069 1367 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms