RNA–Protein interactions for RNA: ENST00000468875.1

MRPL53-204, Transcript of mitochondrial ribosomal protein L53, humanhuman

TSL 2

Gene MRPL53, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53-204ENST00000468875 NISCHQ9Y2I1 1504 aa37.54■■■■□ 3.6
MRPL53-204ENST00000468875 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
MRPL53-204ENST00000468875 ABCC9O60706 1549 aa33.12■■■□□ 2.89
MRPL53-204ENST00000468875 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
MRPL53-204ENST00000468875 NACADO15069 1562 aa31.57■■■□□ 2.64
MRPL53-204ENST00000468875 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
MRPL53-204ENST00000468875 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
MRPL53-204ENST00000468875 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
MRPL53-204ENST00000468875 UNC13AQ9UPW8 1703 aa31.11■■■□□ 2.57
MRPL53-204ENST00000468875 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
MRPL53-204ENST00000468875 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
MRPL53-204ENST00000468875 BICRAQ9NZM4 1560 aa30.86■■■□□ 2.53
MRPL53-204ENST00000468875 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
MRPL53-204ENST00000468875 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
MRPL53-204ENST00000468875 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
MRPL53-204ENST00000468875 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
MRPL53-204ENST00000468875 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
MRPL53-204ENST00000468875 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
MRPL53-204ENST00000468875 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
MRPL53-204ENST00000468875 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
MRPL53-204ENST00000468875 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
MRPL53-204ENST00000468875 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
MRPL53-204ENST00000468875 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
MRPL53-204ENST00000468875 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
MRPL53-204ENST00000468875 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
MRPL53-204ENST00000468875 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
MRPL53-204ENST00000468875 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
MRPL53-204ENST00000468875 WIZO95785 1651 aa28.64■■■□□ 2.17
MRPL53-204ENST00000468875 NESP48681 1621 aa28.62■■■□□ 2.17
MRPL53-204ENST00000468875 ERCC6Q03468 1493 aa28.49■■■□□ 2.15
MRPL53-204ENST00000468875 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
MRPL53-204ENST00000468875 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
MRPL53-204ENST00000468875 CUX2O14529 1486 aa28.36■■■□□ 2.13
MRPL53-204ENST00000468875 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
MRPL53-204ENST00000468875 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.12
MRPL53-204ENST00000468875 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
MRPL53-204ENST00000468875 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
MRPL53-204ENST00000468875 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
MRPL53-204ENST00000468875 CFTRP13569 1480 aa28.06■■■□□ 2.08
MRPL53-204ENST00000468875 MRC2Q9UBG0 1479 aa27.96■■■□□ 2.07
MRPL53-204ENST00000468875 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
MRPL53-204ENST00000468875 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
MRPL53-204ENST00000468875 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
MRPL53-204ENST00000468875 WDR62O43379 1518 aa27.92■■■□□ 2.06
MRPL53-204ENST00000468875 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
MRPL53-204ENST00000468875 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
MRPL53-204ENST00000468875 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
MRPL53-204ENST00000468875 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
MRPL53-204ENST00000468875 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
MRPL53-204ENST00000468875 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
MRPL53-204ENST00000468875 ABCC8Q09428 1581 aa27.38■■□□□ 1.97
MRPL53-204ENST00000468875 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
MRPL53-204ENST00000468875 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
MRPL53-204ENST00000468875 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
MRPL53-204ENST00000468875 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
MRPL53-204ENST00000468875 CUX1P39880 1505 aa27.18■■□□□ 1.94
MRPL53-204ENST00000468875 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
MRPL53-204ENST00000468875 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
MRPL53-204ENST00000468875 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
MRPL53-204ENST00000468875 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.93
MRPL53-204ENST00000468875 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
MRPL53-204ENST00000468875 SOGA1O94964 1423 aa27.07■■□□□ 1.92
MRPL53-204ENST00000468875 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
MRPL53-204ENST00000468875 WDR97A6NE52 1622 aa26.95■■□□□ 1.91
MRPL53-204ENST00000468875 CHD1O14646 1710 aa26.94■■□□□ 1.9
MRPL53-204ENST00000468875 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.89
MRPL53-204ENST00000468875 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
MRPL53-204ENST00000468875 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
MRPL53-204ENST00000468875 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
MRPL53-204ENST00000468875 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
MRPL53-204ENST00000468875 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
MRPL53-204ENST00000468875 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
MRPL53-204ENST00000468875 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
MRPL53-204ENST00000468875 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
MRPL53-204ENST00000468875 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
MRPL53-204ENST00000468875 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
MRPL53-204ENST00000468875 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
MRPL53-204ENST00000468875 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
MRPL53-204ENST00000468875 GAPVD1Q14C86 1478 aa26.75■■□□□ 1.87
MRPL53-204ENST00000468875 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
MRPL53-204ENST00000468875 FBLN2P98095 1184 aa26.75■■□□□ 1.87
MRPL53-204ENST00000468875 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
MRPL53-204ENST00000468875 SYNJ2O15056 1496 aa26.67■■□□□ 1.86
MRPL53-204ENST00000468875 CLASP1Q7Z460 1538 aa26.64■■□□□ 1.85
MRPL53-204ENST00000468875 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
MRPL53-204ENST00000468875 ADAMTS12P58397 1594 aa26.52■■□□□ 1.84
MRPL53-204ENST00000468875 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
MRPL53-204ENST00000468875 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
MRPL53-204ENST00000468875 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
MRPL53-204ENST00000468875 GRIN2AQ12879 1464 aa26.46■■□□□ 1.83
MRPL53-204ENST00000468875 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
MRPL53-204ENST00000468875 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
MRPL53-204ENST00000468875 NUP160Q12769 1436 aa26.39■■□□□ 1.82
MRPL53-204ENST00000468875 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
MRPL53-204ENST00000468875 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
MRPL53-204ENST00000468875 IGF1RP08069 1367 aa26.26■■□□□ 1.79
MRPL53-204ENST00000468875 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
MRPL53-204ENST00000468875 CUL7Q14999 1698 aa26.15■■□□□ 1.78
MRPL53-204ENST00000468875 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
MRPL53-204ENST00000468875 JPH4Q96JJ6 628 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms