Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AP004833.2-201ENST00000532228 1454 ntBASIC23.17■■□□□ 1.3
HTR1AP08908 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.17■■□□□ 1.3
HTR1AP08908 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
HTR1AP08908 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
HTR1AP08908 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTR1AP08908 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
HTR1AP08908 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HTR1AP08908 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.16■■□□□ 1.3
HTR1AP08908 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HTR1AP08908 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.15■■□□□ 1.3
HTR1AP08908 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HTR1AP08908 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HTR1AP08908 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HTR1AP08908 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HTR1AP08908 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
HTR1AP08908 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR1AP08908 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR1AP08908 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR1AP08908 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR1AP08908 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HTR1AP08908 AC093323.1-202ENST00000635031 2045 ntBASIC23.11■■□□□ 1.29
HTR1AP08908 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HTR1AP08908 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HTR1AP08908 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.11■■□□□ 1.29
HTR1AP08908 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.1■■□□□ 1.29
HTR1AP08908 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.1■■□□□ 1.29
HTR1AP08908 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
HTR1AP08908 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HTR1AP08908 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
HTR1AP08908 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.09■■□□□ 1.29
HTR1AP08908 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HTR1AP08908 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HTR1AP08908 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HTR1AP08908 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.07■■□□□ 1.28
HTR1AP08908 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.07■■□□□ 1.28
HTR1AP08908 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.06■■□□□ 1.28
HTR1AP08908 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HTR1AP08908 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.06■■□□□ 1.28
HTR1AP08908 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HTR1AP08908 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HTR1AP08908 AC145676.1-201ENST00000514988 2004 ntBASIC23.06■■□□□ 1.28
HTR1AP08908 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
HTR1AP08908 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HTR1AP08908 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
HTR1AP08908 AL133380.1-201ENST00000506013 324 ntBASIC23.05■■□□□ 1.28
HTR1AP08908 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
HTR1AP08908 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HTR1AP08908 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.02■■□□□ 1.28
HTR1AP08908 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HTR1AP08908 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HTR1AP08908 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HTR1AP08908 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
HTR1AP08908 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
HTR1AP08908 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HTR1AP08908 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23■■□□□ 1.27
HTR1AP08908 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HTR1AP08908 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
HTR1AP08908 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23■■□□□ 1.27
HTR1AP08908 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HTR1AP08908 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HTR1AP08908 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.99■■□□□ 1.27
HTR1AP08908 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HTR1AP08908 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.98■■□□□ 1.27
HTR1AP08908 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HTR1AP08908 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HTR1AP08908 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HTR1AP08908 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HTR1AP08908 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.98■■□□□ 1.27
HTR1AP08908 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HTR1AP08908 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.97■■□□□ 1.27
HTR1AP08908 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HTR1AP08908 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
HTR1AP08908 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HTR1AP08908 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.97■■□□□ 1.27
HTR1AP08908 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HTR1AP08908 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HTR1AP08908 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
HTR1AP08908 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
HTR1AP08908 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
HTR1AP08908 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.95■■□□□ 1.26
HTR1AP08908 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.95■■□□□ 1.26
HTR1AP08908 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HTR1AP08908 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.95■■□□□ 1.26
HTR1AP08908 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
HTR1AP08908 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.94■■□□□ 1.26
HTR1AP08908 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
HTR1AP08908 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HTR1AP08908 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HTR1AP08908 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
HTR1AP08908 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.94■■□□□ 1.26
HTR1AP08908 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HTR1AP08908 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HTR1AP08908 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.93■■□□□ 1.26
HTR1AP08908 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.93■■□□□ 1.26
HTR1AP08908 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms