Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DQA2P01906 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
HLA-DQA2P01906 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 MIR6090-201ENST00000622481 60 ntBASIC22.62■■□□□ 1.21
HLA-DQA2P01906 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DQA2P01906 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQA2P01906 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQA2P01906 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HLA-DQA2P01906 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HLA-DQA2P01906 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQA2P01906 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HLA-DQA2P01906 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
HLA-DQA2P01906 AL121749.1-202ENST00000609313 2153 ntBASIC22.59■■□□□ 1.21
HLA-DQA2P01906 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
HLA-DQA2P01906 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQA2P01906 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.59■■□□□ 1.21
HLA-DQA2P01906 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQA2P01906 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.58■■□□□ 1.21
HLA-DQA2P01906 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
HLA-DQA2P01906 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.58■■□□□ 1.21
HLA-DQA2P01906 AP006261.1-201ENST00000584783 668 ntBASIC22.58■■□□□ 1.21
HLA-DQA2P01906 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
HLA-DQA2P01906 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
HLA-DQA2P01906 LINC01003-201ENST00000564834 1764 ntBASIC22.58■■□□□ 1.2
HLA-DQA2P01906 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQA2P01906 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.57■■□□□ 1.2
HLA-DQA2P01906 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQA2P01906 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.57■■□□□ 1.2
HLA-DQA2P01906 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQA2P01906 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 AC135983.2-203ENST00000454486 1613 ntBASIC22.56■■□□□ 1.2
HLA-DQA2P01906 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQA2P01906 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HLA-DQA2P01906 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQA2P01906 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQA2P01906 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.54■■□□□ 1.2
HLA-DQA2P01906 AP002414.2-202ENST00000590929 1450 ntBASIC22.54■■□□□ 1.2
HLA-DQA2P01906 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
HLA-DQA2P01906 WHAMMP2-203ENST00000563942 1603 ntBASIC22.53■■□□□ 1.2
HLA-DQA2P01906 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA2P01906 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA2P01906 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA2P01906 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQA2P01906 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.52■■□□□ 1.2
HLA-DQA2P01906 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
HLA-DQA2P01906 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.51■■□□□ 1.19
HLA-DQA2P01906 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.51■■□□□ 1.19
HLA-DQA2P01906 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HLA-DQA2P01906 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DQA2P01906 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.5■■□□□ 1.19
HLA-DQA2P01906 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DQA2P01906 LINC00273-201ENST00000539813 1452 ntBASIC22.5■■□□□ 1.19
HLA-DQA2P01906 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DQA2P01906 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DQA2P01906 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DQA2P01906 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DQA2P01906 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.48■■□□□ 1.19
HLA-DQA2P01906 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DQA2P01906 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.48■■□□□ 1.19
HLA-DQA2P01906 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.47■■□□□ 1.19
HLA-DQA2P01906 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HLA-DQA2P01906 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HLA-DQA2P01906 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DQA2P01906 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DQA2P01906 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.46■■□□□ 1.19
HLA-DQA2P01906 AC087741.3-201ENST00000624270 1347 ntBASIC22.46■■□□□ 1.19
HLA-DQA2P01906 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DQA2P01906 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HLA-DQA2P01906 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
HLA-DQA2P01906 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DQA2P01906 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HLA-DQA2P01906 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 AL162393.1-201ENST00000437852 946 ntBASIC22.44■■□□□ 1.18
HLA-DQA2P01906 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HLA-DQA2P01906 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DQA2P01906 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DQA2P01906 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DQA2P01906 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HLA-DQA2P01906 AC044849.2-201ENST00000606596 710 ntBASIC22.43■■□□□ 1.18
HLA-DQA2P01906 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.43■■□□□ 1.18
HLA-DQA2P01906 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms