Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-3A0A0B4J271 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV12-3A0A0B4J271 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV12-3A0A0B4J271 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV12-3A0A0B4J271 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV12-3A0A0B4J271 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 AC135983.2-203ENST00000454486 1613 ntBASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV12-3A0A0B4J271 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
TRAV12-3A0A0B4J271 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV12-3A0A0B4J271 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV12-3A0A0B4J271 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV12-3A0A0B4J271 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV12-3A0A0B4J271 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-3A0A0B4J271 WHAMMP2-203ENST00000563942 1603 ntBASIC18.71■□□□□ 0.58
TRAV12-3A0A0B4J271 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 LINC01003-201ENST00000564834 1764 ntBASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 AL121749.1-202ENST00000609313 2153 ntBASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TRAV12-3A0A0B4J271 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV12-3A0A0B4J271 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAV12-3A0A0B4J271 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV12-3A0A0B4J271 AP002414.2-202ENST00000590929 1450 ntBASIC18.69■□□□□ 0.58
TRAV12-3A0A0B4J271 AC087741.3-201ENST00000624270 1347 ntBASIC18.69■□□□□ 0.58
TRAV12-3A0A0B4J271 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 AL162393.1-201ENST00000437852 946 ntBASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 LINC00273-201ENST00000539813 1452 ntBASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV12-3A0A0B4J271 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV12-3A0A0B4J271 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV12-3A0A0B4J271 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV12-3A0A0B4J271 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRAV12-3A0A0B4J271 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV12-3A0A0B4J271 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV12-3A0A0B4J271 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV12-3A0A0B4J271 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV12-3A0A0B4J271 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV12-3A0A0B4J271 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV12-3A0A0B4J271 AC044849.2-201ENST00000606596 710 ntBASIC18.65■□□□□ 0.58
TRAV12-3A0A0B4J271 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV12-3A0A0B4J271 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-3A0A0B4J271 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-3A0A0B4J271 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-3A0A0B4J271 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-3A0A0B4J271 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-3A0A0B4J271 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV12-3A0A0B4J271 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV12-3A0A0B4J271 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV12-3A0A0B4J271 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV12-3A0A0B4J271 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV12-3A0A0B4J271 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV12-3A0A0B4J271 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV12-3A0A0B4J271 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-3A0A0B4J271 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms