Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRAV12-3A0A0B4J271 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRAV12-3A0A0B4J271 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
TRAV12-3A0A0B4J271 AL356512.1-201ENST00000607453 1739 ntBASIC24.33■■□□□ 1.49
TRAV12-3A0A0B4J271 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TRAV12-3A0A0B4J271 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC24.21■■□□□ 1.47
TRAV12-3A0A0B4J271 HES6-203ENST00000409160 1600 ntTSL 2 BASIC24.18■■□□□ 1.46
TRAV12-3A0A0B4J271 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRAV12-3A0A0B4J271 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.96■■□□□ 1.43
TRAV12-3A0A0B4J271 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAV12-3A0A0B4J271 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TRAV12-3A0A0B4J271 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23.75■■□□□ 1.39
TRAV12-3A0A0B4J271 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRAV12-3A0A0B4J271 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.32■■□□□ 1.32
TRAV12-3A0A0B4J271 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAV12-3A0A0B4J271 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV12-3A0A0B4J271 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TRAV12-3A0A0B4J271 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
TRAV12-3A0A0B4J271 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.15■■□□□ 1.3
TRAV12-3A0A0B4J271 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV12-3A0A0B4J271 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
TRAV12-3A0A0B4J271 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV12-3A0A0B4J271 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAV12-3A0A0B4J271 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
TRAV12-3A0A0B4J271 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
TRAV12-3A0A0B4J271 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.73■■□□□ 1.23
TRAV12-3A0A0B4J271 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV12-3A0A0B4J271 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TRAV12-3A0A0B4J271 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV12-3A0A0B4J271 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRAV12-3A0A0B4J271 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV12-3A0A0B4J271 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRAV12-3A0A0B4J271 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV12-3A0A0B4J271 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
TRAV12-3A0A0B4J271 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC22.55■■□□□ 1.2
TRAV12-3A0A0B4J271 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TRAV12-3A0A0B4J271 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV12-3A0A0B4J271 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV12-3A0A0B4J271 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC22.42■■□□□ 1.18
TRAV12-3A0A0B4J271 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV12-3A0A0B4J271 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TRAV12-3A0A0B4J271 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.34■■□□□ 1.17
TRAV12-3A0A0B4J271 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.32■■□□□ 1.16
TRAV12-3A0A0B4J271 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV12-3A0A0B4J271 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC22.15■■□□□ 1.14
TRAV12-3A0A0B4J271 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV12-3A0A0B4J271 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.09■■□□□ 1.13
TRAV12-3A0A0B4J271 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV12-3A0A0B4J271 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRAV12-3A0A0B4J271 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.04■■□□□ 1.12
TRAV12-3A0A0B4J271 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV12-3A0A0B4J271 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV12-3A0A0B4J271 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.97■■□□□ 1.11
TRAV12-3A0A0B4J271 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV12-3A0A0B4J271 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV12-3A0A0B4J271 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.83■■□□□ 1.08
TRAV12-3A0A0B4J271 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV12-3A0A0B4J271 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV12-3A0A0B4J271 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV12-3A0A0B4J271 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV12-3A0A0B4J271 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV12-3A0A0B4J271 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV12-3A0A0B4J271 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRAV12-3A0A0B4J271 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV12-3A0A0B4J271 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV12-3A0A0B4J271 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.68■■□□□ 1.06
TRAV12-3A0A0B4J271 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRAV12-3A0A0B4J271 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV12-3A0A0B4J271 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV12-3A0A0B4J271 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAV12-3A0A0B4J271 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV12-3A0A0B4J271 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV12-3A0A0B4J271 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRAV12-3A0A0B4J271 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV12-3A0A0B4J271 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAV12-3A0A0B4J271 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRAV12-3A0A0B4J271 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV12-3A0A0B4J271 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV12-3A0A0B4J271 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV12-3A0A0B4J271 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV12-3A0A0B4J271 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV12-3A0A0B4J271 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV12-3A0A0B4J271 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV12-3A0A0B4J271 AC015813.7-201ENST00000623294 581 ntBASIC21.43■■□□□ 1.02
TRAV12-3A0A0B4J271 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRAV12-3A0A0B4J271 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV12-3A0A0B4J271 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV12-3A0A0B4J271 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV12-3A0A0B4J271 AC145285.7-201ENST00000614819 1539 ntBASIC21.39■■□□□ 1.02
TRAV12-3A0A0B4J271 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV12-3A0A0B4J271 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV12-3A0A0B4J271 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV12-3A0A0B4J271 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
TRAV12-3A0A0B4J271 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRAV12-3A0A0B4J271 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV12-3A0A0B4J271 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRAV12-3A0A0B4J271 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV12-3A0A0B4J271 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV12-3A0A0B4J271 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV12-3A0A0B4J271 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms